Os05g0163600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0163600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.78 | 0.425 | 7.58 | 1.09 | 0.593 | -1.24 | -0.219 | 0.421 | -0.334 | 21 | 18 | 4997 | -- | -- |
| 81.79 | 0.421 | 7.58 | 1.08 | 0.604 | -1.41 | -0.355 | -- | -0.33 | 20.8 | 18 | 5488 | -- | -- |
| 81.93 | 0.422 | 7.59 | 1.1 | 0.596 | -1.25 | -- | 0.409 | -0.337 | 21.1 | 18 | 5000 | -- | -- |
| 82.03 | 0.422 | 7.57 | 1.1 | 0.605 | -1.42 | -- | -- | -0.333 | 21 | 17.95 | 5468 | -- | -- |
| 102.18 | 0.471 | 7.57 | 1.1 | -- | -1.27 | -- | 0.372 | -0.34 | -- | 18 | 5039 | -- | -- |
| 104.97 | 0.48 | 7.51 | 1.85 | 0.602 | -- | -0.182 | -- | -0.0615 | 21.2 | -- | -- | -- | -- |
| 105.08 | 0.48 | 7.51 | 1.86 | 0.602 | -- | -- | -- | -0.0617 | 21.2 | -- | -- | -- | -- |
| 102.4 | 0.471 | 7.56 | 1.07 | -- | -1.33 | -- | -- | -0.355 | -- | 18.24 | 5080 | -- | -- |
| 89.77 | 0.441 | 7.64 | -- | 0.592 | -1.73 | -- | -- | -0.638 | 21.1 | 17.8 | 47520 | -- | -- |
| 126.14 | 0.525 | 7.49 | 1.86 | -- | -- | -- | -- | -0.0644 | -- | -- | -- | -- | -- |
| 195.92 | 0.655 | 7.56 | -- | 0.603 | -- | -- | -- | -0.268 | 21.5 | -- | -- | -- | -- |
| 107.78 | 0.484 | 7.62 | -- | -- | -1.85 | -- | -- | -0.63 | -- | 17.5 | 37116 | -- | -- |
| 217.29 | 0.688 | 7.54 | -- | -- | -- | -- | -- | -0.271 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.97 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 7 | 79.33 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 28 | 81.45 | humidity | 80 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 30 | 81.65 | humidity | 60 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 36 | 81.79 | temperature | 15 | 270 | > th | dose independent | rect. | 6 | 22 |
| 44 | 81.88 | humidity | 60 | 43200 | < th | dose dependent | rect. | 23 | 11 |
| 51 | 82.02 | temperature | 15 | 90 | > th | dose independent | rect. | 8 | 21 |
| 61 | 82.15 | humidity | 70 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 66 | 82.21 | wind | 7 | 14400 | > th | dose dependent | rect. | 21 | 20 |
| 69 | 82.26 | humidity | 50 | 43200 | < th | dose dependent | sin | 8 | NA |
| 99 | 82.45 | humidity | 60 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 118 | 82.53 | wind | 7 | 14400 | > th | dose independent | rect. | 23 | 18 |
| 127 | 82.55 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 135 | 82.60 | wind | 7 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 150 | 82.64 | humidity | 50 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 162 | 82.67 | wind | 7 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 186 | 82.73 | humidity | 50 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 195 | 82.76 | wind | 9 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 213 | 82.79 | humidity | 70 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 219 | 82.79 | humidity | 70 | 43200 | < th | dose dependent | rect. | 14 | 21 |
| 226 | 82.81 | wind | 5 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 229 | 82.82 | humidity | 70 | 43200 | < th | dose dependent | rect. | 1 | 16 |
| 235 | 82.83 | humidity | 70 | 43200 | < th | dose dependent | rect. | 3 | 14 |
| 257 | 82.87 | temperature | 20 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 266 | 82.88 | humidity | 70 | 43200 | < th | dose dependent | sin | 3 | NA |
| 381 | 82.97 | humidity | 70 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 447 | 83.01 | humidity | 70 | 43200 | < th | dose dependent | no | NA | NA |
| 449 | 83.01 | wind | 5 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 552 | 83.07 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 23 |
| 555 | 83.08 | wind | 7 | 14400 | > th | dose independent | sin | 2 | NA |
| 556 | 83.08 | wind | 7 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 557 | 83.08 | wind | 7 | 14400 | > th | dose dependent | sin | 3 | NA |
| 567 | 83.08 | wind | 7 | 14400 | > th | dose dependent | rect. | 9 | 20 |
| 571 | 83.08 | wind | 7 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 572 | 83.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 584 | 83.09 | wind | 7 | 14400 | > th | dose dependent | rect. | 3 | 22 |
| 592 | 83.10 | humidity | 60 | 43200 | > th | dose independent | sin | 6 | NA |
| 609 | 83.11 | wind | 7 | 14400 | > th | dose dependent | no | NA | NA |
| 647 | 83.12 | wind | 7 | 14400 | > th | dose dependent | rect. | 24 | 23 |
| 648 | 83.13 | wind | 7 | 14400 | < th | dose independent | sin | 1 | NA |
| 651 | 83.13 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 686 | 83.14 | wind | 7 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 690 | 83.15 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 8 | 21 |
| 701 | 83.15 | temperature | 20 | 4320 | < th | dose dependent | rect. | 19 | 15 |
| 717 | 83.16 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 739 | 83.17 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 754 | 83.17 | wind | 7 | 14400 | > th | dose dependent | rect. | 7 | 18 |
| 781 | 83.19 | humidity | 60 | 43200 | < th | dose independent | sin | 5 | NA |
| 786 | 83.19 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 810 | 83.20 | temperature | 20 | 4320 | < th | dose dependent | sin | 9 | NA |
| 811 | 83.20 | temperature | 20 | 4320 | < th | dose dependent | rect. | 19 | 12 |
| 873 | 83.23 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 17 |
| 892 | 83.23 | temperature | 15 | 4320 | < th | dose dependent | rect. | 23 | 21 |
| 930 | 83.25 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 952 | 83.26 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 21 |
| 970 | 83.27 | wind | 7 | 14400 | > th | dose independent | rect. | 11 | 18 |
| 992 | 83.28 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 17 |