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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0161700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0191) R2 : 0.0147
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.105 (0.0402) R2dN8 : 0.019 R2N8 : 0.0147
σ : 0.359
deviance : 59.28
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.71 0.357 2.98 0.13 0.0714 0.311 -0.0102 1.39 0.0879 9.84 7.461 4242 -- --
56.88 0.351 2.96 0.0815 0.0511 0.295 0.0826 -- 0.0805 10 11.27 4151 -- --
56.79 0.351 2.96 0.094 0.0624 0.34 -- 0.943 0.0632 9.37 10.6 4167 -- --
56.82 0.351 2.96 0.065 0.0449 0.314 -- -- 0.0608 10 11.27 4160 -- --
56.76 0.351 2.97 0.146 -- 0.45 -- 1.32 0.0573 -- 10.61 4174 -- --
58.68 0.359 2.95 0.0556 0.0928 -- -0.0102 -- 0.111 9.93 -- -- -- --
58.68 0.359 2.95 0.0552 0.0928 -- -- -- 0.111 9.95 -- -- -- --
56.82 0.351 2.97 0.0507 -- 0.484 -- -- 0.0602 -- 11.38 4211 -- --
56.95 0.351 2.96 -- 0.0454 0.317 -- -- 0.0533 9.96 11.26 4153 -- --
59.2 0.36 2.95 0.0541 -- -- -- -- 0.111 -- -- -- -- --
58.76 0.359 2.95 -- 0.0926 -- -- -- 0.105 9.91 -- -- -- --
56.92 0.351 2.97 -- -- 0.511 -- -- 0.0526 -- 11.39 4218 -- --
59.28 0.359 2.95 -- -- -- -- -- 0.105 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.64 wind 1.0 90 < th dose independent rect. 24 1
2 54.21 atmosphere 995.0 30 > th dose independent rect. 9 23
4 54.72 atmosphere 1005.0 90 < th dose independent rect. 24 1
5 54.83 wind 3.0 10 < th dose dependent rect. 1 1
7 54.93 humidity 80.0 30 < th dose dependent rect. 8 1
8 54.94 temperature 10.0 1440 > th dose independent rect. 9 1
11 54.94 humidity 80.0 30 < th dose independent rect. 8 1
12 54.94 atmosphere 995.0 1440 > th dose independent rect. 9 1
15 54.94 atmosphere 1015.0 1440 < th dose independent rect. 9 1
16 54.94 temperature 10.0 1440 > th dose independent rect. 10 23
20 54.94 atmosphere 1005.0 30 > th dose dependent rect. 8 1
21 54.95 radiation 10.0 30 > th dose independent rect. 8 1
23 54.95 temperature 25.0 30 > th dose dependent rect. 8 1
24 54.95 radiation 10.0 30 > th dose dependent rect. 8 1
25 54.96 temperature 25.0 30 > th dose independent rect. 8 1
27 54.96 atmosphere 1005.0 30 > th dose independent rect. 8 1
33 54.97 wind 1.0 30 > th dose independent rect. 8 1
34 54.97 temperature 15.0 30 > th dose dependent rect. 8 1
38 54.98 wind 5.0 30 < th dose independent rect. 8 1
41 54.98 temperature 10.0 30 > th dose independent rect. 8 1
44 54.98 temperature 30.0 30 < th dose independent rect. 8 1
45 54.98 humidity 50.0 30 > th dose independent rect. 8 1
48 54.98 atmosphere 995.0 30 > th dose independent rect. 8 1
49 54.98 atmosphere 1010.0 30 < th dose independent rect. 8 1
52 54.98 precipitation 0.1 30 < th dose independent rect. 8 1
54 54.98 temperature 10.0 30 > th dose independent rect. 9 23
55 54.98 wind 9.0 30 < th dose dependent rect. 8 1
58 54.98 precipitation 0.1 30 < th dose dependent rect. 8 1
61 54.99 radiation 30.0 30 < th dose independent rect. 8 1
63 54.99 wind 1.0 30 > th dose dependent rect. 8 1
64 54.99 wind 5.0 30 < th dose dependent rect. 8 1
72 55.02 humidity 50.0 30 > th dose dependent rect. 8 1
74 55.02 radiation 40.0 30 < th dose dependent rect. 8 1
79 55.04 atmosphere 1015.0 30 < th dose dependent rect. 8 1
84 55.07 temperature 30.0 30 < th dose dependent rect. 8 1
85 55.08 humidity 50.0 1440 > th dose independent rect. 9 1
91 55.10 wind 9.0 30 < th dose independent rect. 9 23
112 55.13 precipitation 0.1 30 < th dose independent rect. 9 23
115 55.13 precipitation 0.1 30 < th dose dependent rect. 9 23
121 55.16 atmosphere 1005.0 10 < th dose independent rect. 24 2
133 55.19 atmosphere 995.0 30 > th dose independent rect. 2 23
148 55.28 temperature 20.0 30 > th dose dependent rect. 1 1
150 55.33 radiation 40.0 30 < th dose independent rect. 8 18
155 55.39 humidity 90.0 90 > th dose dependent rect. 24 1
157 55.42 temperature 25.0 90 < th dose independent rect. 23 3
167 55.66 atmosphere 1000.0 30 > th dose independent rect. 1 1
169 55.66 temperature 25.0 30 > th dose dependent rect. 6 3
172 55.68 humidity 90.0 90 > th dose independent rect. 1 1
177 55.70 humidity 70.0 30 > th dose dependent rect. 1 1
185 55.77 temperature 25.0 90 < th dose independent rect. 24 1
202 55.91 wind 9.0 1440 < th dose independent rect. 2 1
205 55.91 temperature 10.0 1440 > th dose independent rect. 2 1
208 55.91 temperature 30.0 1440 < th dose independent rect. 2 1
212 55.91 humidity 50.0 1440 > th dose independent rect. 2 1
222 55.91 atmosphere 995.0 1440 > th dose independent rect. 2 1
223 55.91 radiation 1.0 1440 < th dose independent rect. 2 1
244 55.91 temperature 10.0 1440 > th dose independent rect. 3 23
248 55.91 radiation 1.0 1440 < th dose dependent rect. 2 1
274 55.93 precipitation 0.1 30 < th dose independent rect. 1 1
276 55.93 precipitation 0.1 30 < th dose dependent rect. 1 1
281 55.95 temperature 10.0 30 > th dose independent rect. 1 1
284 55.95 humidity 50.0 30 > th dose independent rect. 1 1
290 55.95 radiation 1.0 30 < th dose independent rect. 1 1
295 55.95 temperature 10.0 30 > th dose independent rect. 2 23
298 55.95 radiation 1.0 30 < th dose dependent rect. 1 1
310 55.98 wind 9.0 30 < th dose independent rect. 2 23
344 56.05 humidity 50.0 30 > th dose independent rect. 9 23
363 56.16 humidity 50.0 30 > th dose dependent rect. 2 6
367 56.18 radiation 40.0 30 < th dose dependent rect. 2 6
368 56.19 temperature 25.0 90 < th dose independent rect. 2 9
374 56.21 atmosphere 995.0 30 > th dose dependent rect. 1 1
379 56.23 precipitation 0.1 30 < th dose independent rect. 2 23
380 56.23 atmosphere 1015.0 720 < th dose dependent rect. 14 1
382 56.23 precipitation 0.1 30 < th dose dependent rect. 2 23
386 56.25 radiation 20.0 30 < th dose dependent rect. 2 8
388 56.25 radiation 20.0 30 < th dose dependent rect. 2 23
389 56.26 wind 1.0 90 > th dose independent rect. 1 1
391 56.27 wind 9.0 1440 < th dose independent rect. 3 6
392 56.27 temperature 10.0 1440 > th dose independent rect. 3 6
395 56.27 humidity 50.0 1440 > th dose independent rect. 3 6
397 56.27 atmosphere 995.0 1440 > th dose independent rect. 3 6
398 56.27 temperature 10.0 1440 > th dose independent rect. 9 18
401 56.27 atmosphere 1015.0 30 < th dose independent rect. 9 23
406 56.28 radiation 40.0 30 < th dose dependent rect. 8 18
407 56.29 humidity 70.0 30 > th dose independent rect. 2 6
408 56.29 radiation 30.0 30 < th dose independent rect. 2 6
411 56.30 atmosphere 1015.0 1440 < th dose independent rect. 2 1
426 56.32 wind 9.0 30 < th dose dependent rect. 2 6
429 56.33 wind 9.0 30 < th dose independent rect. 2 6
430 56.33 temperature 10.0 30 > th dose independent rect. 2 6
432 56.33 temperature 30.0 30 < th dose independent rect. 2 6
433 56.33 humidity 50.0 30 > th dose independent rect. 2 6
435 56.33 atmosphere 995.0 30 > th dose independent rect. 2 6
436 56.33 atmosphere 1015.0 30 < th dose independent rect. 2 6
438 56.33 temperature 10.0 30 > th dose independent rect. 8 18
446 56.34 atmosphere 1015.0 30 < th dose dependent rect. 1 1
449 56.35 precipitation 0.1 30 < th dose independent rect. 8 18
453 56.35 precipitation 0.1 30 < th dose dependent rect. 8 18
457 56.36 wind 9.0 30 < th dose independent rect. 8 18
461 56.38 precipitation 0.1 30 < th dose independent rect. 2 6
462 56.38 temperature 25.0 90 < th dose independent rect. 17 9
463 56.38 precipitation 0.1 30 < th dose dependent rect. 2 6
470 56.41 atmosphere 1015.0 30 < th dose independent rect. 2 23
488 56.44 atmosphere 1015.0 30 < th dose independent rect. 8 18
491 56.44 temperature 25.0 30 > th dose dependent rect. 20 13
511 56.46 atmosphere 995.0 90 > th dose independent rect. 2 21
522 56.49 humidity 80.0 30 < th dose independent rect. 1 8
533 56.51 atmosphere 1005.0 720 < th dose independent rect. 14 3
541 56.52 atmosphere 1005.0 720 < th dose independent rect. 14 1
552 56.53 wind 3.0 270 < th dose dependent rect. 21 2
559 56.54 atmosphere 995.0 90 > th dose independent rect. 2 17
575 56.56 atmosphere 1005.0 720 > th dose independent rect. 18 1
584 56.56 radiation 40.0 30 < th dose independent rect. 10 16
599 56.57 temperature 10.0 30 > th dose dependent rect. 2 6
607 56.59 radiation 10.0 90 < th dose independent rect. 2 9
610 56.59 atmosphere 995.0 30 > th dose dependent rect. 2 6
623 56.61 atmosphere 1015.0 1440 < th dose independent rect. 3 6
636 56.62 atmosphere 1015.0 720 < th dose dependent rect. 14 3
656 56.65 temperature 25.0 90 > th dose independent rect. 5 6
681 56.66 temperature 30.0 30 < th dose independent rect. 9 23
709 56.67 temperature 10.0 270 > th dose independent rect. 4 22
721 56.68 atmosphere 1005.0 720 < th dose independent rect. 14 5
752 56.70 wind 1.0 30 > th dose independent rect. 8 18
753 56.70 humidity 50.0 30 > th dose independent rect. 8 18
755 56.70 precipitation 0.1 270 < th dose independent rect. 4 22
763 56.70 precipitation 0.1 270 < th dose dependent rect. 4 22
813 56.73 atmosphere 995.0 270 > th dose independent rect. 9 11
814 56.73 temperature 25.0 90 < th dose independent rect. 2 13
832 56.74 temperature 25.0 90 < th dose independent rect. 2 11
837 56.74 humidity 90.0 30 < th dose dependent rect. 1 8
845 56.75 radiation 10.0 10 < th dose independent rect. 2 23
847 56.75 atmosphere 995.0 270 > th dose dependent rect. 2 1
855 56.76 wind 9.0 270 < th dose independent rect. 4 22
861 56.76 radiation 40.0 30 < th dose dependent rect. 10 16
866 56.77 atmosphere 995.0 270 > th dose independent rect. 23 23
870 56.77 temperature 10.0 90 > th dose dependent rect. 2 4
886 56.78 humidity 50.0 30 > th dose dependent rect. 2 11
890 56.79 wind 9.0 1440 < th dose independent rect. 3 4
891 56.79 temperature 10.0 1440 > th dose independent rect. 3 4
894 56.79 temperature 30.0 1440 < th dose independent rect. 3 4
898 56.79 humidity 50.0 1440 > th dose independent rect. 3 4
903 56.79 atmosphere 995.0 1440 > th dose independent rect. 3 4
904 56.79 radiation 40.0 1440 < th dose independent rect. 3 4
911 56.79 temperature 10.0 1440 > th dose independent rect. 7 20
915 56.79 atmosphere 1015.0 90 < th dose dependent rect. 23 3
933 56.80 wind 9.0 10 < th dose dependent rect. 8 18
975 56.82 atmosphere 995.0 270 > th dose independent rect. 15 14
980 56.82 atmosphere 995.0 90 > th dose dependent rect. 2 4
988 56.83 wind 9.0 720 < th dose independent rect. 14 1
995 56.83 radiation 40.0 30 < th dose independent rect. 8 7