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Os05g0160600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase, trypsin-like serine and cysteine domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8 (0.0393) R2 : 0.807
β1 : 1.56 (0.203) R2dD : 0.0842 R2D : 0.256
β2 : 1.02 (0.0772) R2dC : 0.0757 R2C : 0.0813
β3 : 1.33 (0.125) R2dE : 0.0643 R2E : 0.243
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -6.16 (0.616) R2dD*E : 0.144 R2D*E : 0.389
γ1 : 0.996 (0.0835) R2dN8 : 0.129 R2N8 : 0.143
σ : 0.577
deviance : 153.42
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_____
C
peak time of C : 20.9
E
wheather : temperature
threshold : 17.78
memory length : 3718
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
138.5 0.553 7.99 1.58 1.07 1.27 -2.31 -5.67 1.03 20.9 17.5 4170 -- --
163.03 0.595 7.77 3.14 0.939 1.52 -2.24 -- 1.4 21 1.474 2232 -- --
153.42 0.577 8 1.56 1.02 1.33 -- -6.16 0.996 20.9 17.78 3718 -- --
181.97 0.628 7.76 3.19 0.959 1.47 -- -- 1.41 20.8 10.61 2308 -- --
175.65 0.617 7.9 2.02 -- 2.22 -- -6.12 1.06 -- 16.6 716 -- --
204.97 0.671 7.7 3.66 1.09 -- -2.25 -- 1.71 21.2 -- -- -- --
223.03 0.699 7.7 3.74 1.1 -- -- -- 1.71 21.2 -- -- -- --
209.57 0.674 7.75 3.16 -- 2.3 -- -- 1.35 -- 14.7 720 -- --
241.91 0.724 7.99 -- 1.07 3.01 -- -- 0.395 21 2.638 47520 -- --
293.45 0.8 7.67 3.74 -- -- -- -- 1.7 -- -- -- -- --
591.64 1.14 7.79 -- 1.1 -- -- -- 1.29 21.4 -- -- -- --
307.58 0.817 7.97 -- -- 3.03 -- -- 0.382 -- 2.01 47520 -- --
663.09 1.2 7.76 -- -- -- -- -- 1.29 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 128.63 radiation 1.0 43200 < th dose dependent rect. 7 1
2 128.90 radiation 30.0 43200 < th dose independent rect. 5 2
4 129.22 radiation 1.0 43200 < th dose independent rect. 7 2
5 129.23 radiation 1.0 43200 > th dose independent rect. 7 2
7 129.31 radiation 30.0 43200 < th dose independent rect. 18 13
15 129.87 radiation 30.0 43200 < th dose independent rect. 1 6
25 130.68 wind 1.0 43200 > th dose independent rect. 24 1
43 131.15 humidity 70.0 43200 > th dose independent rect. 6 5
50 131.25 radiation 10.0 43200 < th dose independent rect. 13 1
51 131.26 temperature 20.0 43200 < th dose independent rect. 21 2
53 131.34 temperature 20.0 43200 > th dose independent rect. 21 2
55 131.36 humidity 80.0 43200 > th dose dependent rect. 10 1
57 131.39 humidity 70.0 43200 < th dose independent rect. 5 6
63 131.44 humidity 90.0 43200 > th dose independent rect. 9 2
64 131.44 wind 7.0 43200 > th dose dependent rect. 5 1
65 131.48 temperature 20.0 4320 < th dose independent rect. 21 2
66 131.49 temperature 20.0 43200 < th dose independent rect. 20 5
70 131.53 wind 9.0 43200 < th dose independent rect. 18 1
75 131.57 radiation 10.0 43200 < th dose independent rect. 18 12
80 131.61 temperature 20.0 43200 > th dose independent rect. 20 5
86 131.66 radiation 10.0 43200 < th dose independent rect. 5 1
91 131.69 radiation 10.0 43200 < th dose independent rect. 1 5
95 131.70 radiation 10.0 43200 < th dose independent rect. 22 8
101 131.74 wind 5.0 43200 < th dose independent rect. 14 2
102 131.74 wind 5.0 43200 > th dose dependent rect. 11 1
103 131.77 humidity 70.0 43200 > th dose independent rect. 8 1
105 131.80 wind 5.0 43200 > th dose independent rect. 14 2
125 132.00 temperature 20.0 4320 > th dose independent rect. 22 1
127 132.00 wind 5.0 43200 < th dose independent rect. 14 6
131 132.02 wind 9.0 43200 > th dose independent rect. 18 1
133 132.02 wind 9.0 43200 > th dose dependent rect. 18 3
143 132.14 wind 7.0 43200 > th dose independent rect. 10 2
146 132.15 wind 1.0 43200 > th dose dependent rect. 14 1
150 132.17 wind 5.0 43200 > th dose independent rect. 14 6
161 132.22 wind 7.0 43200 < th dose independent rect. 10 2
164 132.22 wind 9.0 43200 < th dose dependent rect. 14 1
184 132.38 wind 1.0 43200 > th dose independent rect. 23 3
189 132.42 wind 9.0 43200 > th dose independent rect. 18 3
191 132.45 precipitation 0.1 43200 > th dose independent rect. 9 1
192 132.45 temperature 20.0 1440 < th dose independent rect. 4 3
194 132.45 precipitation 0.1 43200 > th dose dependent rect. 9 1
200 132.49 wind 7.0 43200 > th dose independent rect. 5 1
202 132.50 humidity 90.0 43200 < th dose independent rect. 10 1
208 132.52 precipitation 0.1 43200 < th dose independent rect. 9 1
209 132.52 precipitation 0.1 43200 < th dose dependent rect. 9 1
217 132.54 wind 7.0 43200 < th dose independent rect. 9 4
226 132.58 wind 7.0 43200 > th dose independent rect. 9 4
230 132.60 humidity 70.0 43200 < th dose dependent rect. 11 1
231 132.62 radiation 1.0 43200 < th dose independent rect. 18 4
233 132.63 radiation 1.0 43200 < th dose independent rect. 18 7
240 132.65 radiation 1.0 43200 < th dose independent rect. 18 1
255 132.73 temperature 20.0 43200 < th dose independent rect. 19 13
269 132.80 radiation 1.0 43200 < th dose independent rect. 10 1
270 132.80 radiation 1.0 43200 < th dose dependent rect. 10 1
273 132.82 radiation 1.0 43200 > th dose independent rect. 10 1
282 132.87 temperature 20.0 43200 > th dose independent rect. 18 14
283 132.88 wind 7.0 43200 < th dose independent rect. 5 1
293 132.92 temperature 20.0 1440 > th dose independent rect. 4 3
312 132.99 temperature 20.0 43200 < th dose independent sin 12 NA
333 133.06 humidity 90.0 43200 > th dose dependent rect. 13 1
343 133.09 temperature 20.0 43200 > th dose independent sin 12 NA
371 133.21 humidity 80.0 43200 < th dose dependent rect. 8 2
375 133.24 wind 5.0 43200 > th dose dependent rect. 10 3
394 133.32 humidity 80.0 43200 > th dose dependent rect. 10 4
415 133.39 humidity 70.0 43200 < th dose dependent rect. 8 5
424 133.41 humidity 90.0 43200 > th dose dependent rect. 8 3
425 133.42 temperature 20.0 43200 > th dose independent rect. 6 2
448 133.45 wind 3.0 43200 > th dose dependent rect. 13 7
451 133.46 humidity 70.0 43200 < th dose dependent rect. 6 7
465 133.52 humidity 70.0 43200 > th dose independent rect. 19 1
494 133.60 temperature 20.0 43200 < th dose independent rect. 6 2
507 133.63 radiation 1.0 14400 < th dose dependent rect. 18 13
516 133.67 humidity 70.0 43200 < th dose independent rect. 19 1
553 133.74 humidity 60.0 43200 > th dose independent rect. 18 20
557 133.75 humidity 60.0 43200 > th dose independent rect. 21 17
576 133.81 wind 1.0 43200 < th dose independent rect. 24 1
592 133.86 radiation 30.0 43200 < th dose independent rect. 9 1
598 133.87 wind 1.0 43200 > th dose independent rect. 21 5
703 134.11 wind 9.0 43200 > th dose independent rect. 24 1
704 134.11 humidity 60.0 43200 > th dose independent rect. 11 1
706 134.11 wind 9.0 43200 > th dose dependent rect. 24 1
711 134.13 humidity 70.0 43200 < th dose independent sin 3 NA
781 134.26 radiation 10.0 43200 > th dose dependent rect. 9 1
783 134.27 humidity 60.0 43200 > th dose independent sin 5 NA
820 134.32 humidity 70.0 43200 < th dose independent rect. 18 3
822 134.32 humidity 70.0 43200 < th dose independent rect. 4 18
823 134.32 radiation 1.0 14400 < th dose dependent rect. 4 3
825 134.32 radiation 1.0 43200 < th dose dependent rect. 4 8
867 134.38 humidity 60.0 43200 < th dose independent rect. 18 20
875 134.39 radiation 1.0 14400 < th dose dependent rect. 20 11
923 134.48 wind 3.0 43200 < th dose dependent rect. 20 2
987 134.57 temperature 25.0 4320 < th dose independent rect. 10 8