Os05g0158500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S10, serine carboxypeptidase family protein.
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Os05g0158500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S10, serine carboxypeptidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.69 | 0.455 | 10.1 | 1.31 | 3.88 | 2.62 | 1.16 | -0.78 | 0.951 | 20.8 | 48.97 | 70 | 22.8 | -- |
| 94.63 | 0.453 | 10.2 | 1.35 | 3.92 | 2.63 | 1.37 | -- | 0.96 | 20.9 | 46.99 | 64 | 22.7 | -- |
| 95.39 | 0.455 | 10.2 | 1.34 | 4.48 | 3.27 | -- | -2.11 | 0.973 | 20.7 | 39.48 | 57 | 22.6 | -- |
| 102.07 | 0.471 | 10.2 | 1.3 | 4.3 | 2.95 | -- | -- | 0.947 | 21 | 39.29 | 54 | 22.1 | -- |
| 169.41 | 0.61 | 10 | 1.31 | -- | 2.74 | -- | 1.15 | 0.965 | -- | 16.23 | 50 | 8.13 | -- |
| 144.44 | 0.563 | 10.1 | 1.35 | 2.53 | -- | 1.08 | -- | 0.936 | 22.9 | -- | -- | -- | -- |
| 149.3 | 0.572 | 10.1 | 1.31 | 2.52 | -- | -- | -- | 0.932 | 22.9 | -- | -- | -- | -- |
| 160.47 | 0.593 | 10 | 1.3 | -- | 2.66 | -- | -- | 0.955 | -- | -12.44 | 4 | 7.54 | -- |
| 146.15 | 0.563 | 10.2 | -- | 4.16 | 2.94 | -- | -- | 0.809 | 20.8 | 42.32 | 48 | 22.6 | -- |
| 544.89 | 1.09 | 10 | 1.36 | -- | -- | -- | -- | 0.949 | -- | -- | -- | -- | -- |
| 194.38 | 0.652 | 10.1 | -- | 2.54 | -- | -- | -- | 0.786 | 22.9 | -- | -- | -- | -- |
| 194.89 | 0.652 | 10.1 | -- | -- | 2.53 | -- | -- | 0.789 | -- | -825.3 | 6 | 7.11 | -- |
| 593.84 | 1.14 | 10.1 | -- | -- | -- | -- | -- | 0.798 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.05 | humidity | 50 | 90 | > th | dose dependent | sin | 5 | NA |
| 2 | 94.29 | humidity | 50 | 10 | > th | dose dependent | sin | 4 | NA |
| 20 | 98.89 | humidity | 90 | 10 | < th | dose dependent | sin | 4 | NA |
| 27 | 99.21 | radiation | 10 | 270 | < th | dose dependent | sin | 5 | NA |
| 41 | 100.20 | radiation | 10 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 52 | 100.97 | humidity | 90 | 10 | < th | dose dependent | rect. | 22 | 18 |
| 53 | 100.98 | radiation | 20 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 58 | 101.50 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 63 | 101.90 | humidity | 60 | 90 | > th | dose dependent | rect. | 2 | 15 |
| 67 | 102.00 | humidity | 70 | 90 | > th | dose dependent | rect. | 1 | 10 |
| 74 | 102.31 | radiation | 10 | 270 | < th | dose independent | rect. | 1 | 8 |
| 76 | 102.34 | humidity | 90 | 90 | < th | dose dependent | rect. | 22 | 17 |
| 104 | 103.01 | humidity | 90 | 10 | < th | dose dependent | rect. | 2 | 14 |
| 142 | 103.60 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 7 |
| 153 | 103.74 | humidity | 80 | 90 | > th | dose independent | rect. | 2 | 9 |
| 202 | 104.21 | radiation | 10 | 270 | < th | dose independent | rect. | 1 | 12 |
| 212 | 104.29 | humidity | 90 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 229 | 104.51 | humidity | 60 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 412 | 106.12 | humidity | 60 | 10 | > th | dose dependent | rect. | 3 | 11 |
| 418 | 106.24 | humidity | 80 | 10 | > th | dose independent | sin | 3 | NA |
| 428 | 106.34 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 8 |
| 440 | 106.47 | humidity | 60 | 10 | > th | dose dependent | rect. | 3 | 9 |
| 462 | 106.66 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 15 |
| 486 | 106.82 | radiation | 10 | 270 | < th | dose independent | sin | 6 | NA |
| 564 | 107.37 | humidity | 80 | 90 | > th | dose independent | rect. | 2 | 16 |
| 573 | 107.44 | humidity | 80 | 90 | > th | dose independent | sin | 4 | NA |
| 574 | 107.45 | humidity | 80 | 90 | > th | dose independent | rect. | 2 | 13 |
| 578 | 107.46 | radiation | 1 | 270 | > th | dose independent | sin | 4 | NA |
| 617 | 107.70 | radiation | 1 | 270 | > th | dose independent | rect. | 4 | 10 |
| 656 | 107.88 | radiation | 1 | 90 | > th | dose dependent | sin | 4 | NA |
| 702 | 108.11 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 13 |
| 708 | 108.16 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 11 |
| 715 | 108.18 | radiation | 10 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 850 | 108.80 | radiation | 40 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 869 | 108.88 | radiation | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 917 | 109.13 | humidity | 80 | 10 | < th | dose independent | sin | 3 | NA |
| 940 | 109.24 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 1 | 6 |
| 951 | 109.29 | radiation | 40 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 959 | 109.32 | radiation | 30 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 969 | 109.37 | radiation | 20 | 90 | < th | dose independent | rect. | 3 | 16 |
| 990 | 109.44 | humidity | 80 | 90 | < th | dose independent | sin | 4 | NA |