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Os05g0157300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : 4Fe-4S ferredoxin, iron-sulfur binding domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.2 (0.0325) R2 : 0.881
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.78 (0.117) R2dC : 0.285 R2C : 0.643
β3 : -2.52 (0.117) R2dE : 0.238 R2E : 0.591
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.356 (0.0686) R2dN8 : 0.00921 R2N8 : -0.00406
σ : 0.608
deviance : 170.39
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_____
C
peak time of C : 16.7
E
wheather : precipitation
threshold : 0.1547
memory length : 285
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 2.57
open length of G : 3.08

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
163.12 0.6 9.19 0.129 2.68 -2.59 -2.16 -1.34 0.376 16.6 0.213 297 2.32 3.35
165.13 0.599 9.18 0.212 2.73 -2.58 -1.32 -- 0.398 16.6 0.2873 289 2.48 3.2
169.49 0.606 9.2 0.174 2.76 -2.53 -- -0.00932 0.356 16.7 0.1222 285 2.57 3.07
169.44 0.606 9.19 0.191 2.77 -2.53 -- -- 0.379 16.7 0.2271 285 2.56 3.12
352.69 0.875 9.16 0.294 -- -4.26 -- 0.17 0.443 -- 0.2429 319 2.17 3.13
313.14 0.83 9.27 0.12 4.64 -- -1.05 -- 0.206 17.3 -- -- -- --
315.86 0.832 9.27 0.121 4.63 -- -- -- 0.201 17.3 -- -- -- --
335.95 0.854 9.14 -0.303 -- -4.26 -- -- 0.295 -- 6.442 344 1.62 3.72
170.39 0.608 9.2 -- 2.78 -2.52 -- -- 0.356 16.7 0.1547 285 2.57 3.08
1434.74 1.77 9.22 -0.039 -- -- -- -- 0.0859 -- -- -- -- --
316.24 0.832 9.28 -- 4.63 -- -- -- 0.188 17.3 -- -- -- --
313.23 0.824 9.15 -- -- -4.47 -- -- 0.38 -- 6.521 324 1.26 4.37
1434.78 1.77 9.21 -- -- -- -- -- 0.0903 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 167.75 precipitation 0.1 270 < th dose independent rect. 2 4
2 167.75 precipitation 0.1 270 < th dose dependent rect. 2 4
5 169.28 wind 9.0 270 < th dose dependent rect. 3 3
10 172.24 wind 9.0 270 < th dose independent rect. 6 20
11 172.41 wind 7.0 270 < th dose independent rect. 2 4
14 172.66 temperature 10.0 270 > th dose independent rect. 2 4
16 172.66 temperature 30.0 270 < th dose independent rect. 2 4
17 172.66 humidity 50.0 270 > th dose independent rect. 2 4
20 172.66 atmosphere 995.0 270 > th dose independent rect. 2 4
21 172.66 atmosphere 1015.0 270 < th dose independent rect. 2 4
22 172.66 radiation 20.0 270 < th dose independent rect. 2 4
25 172.66 temperature 10.0 270 > th dose independent rect. 6 20
27 173.57 humidity 50.0 270 > th dose dependent rect. 2 4
28 173.69 precipitation 0.1 270 < th dose independent rect. 6 20
29 173.69 precipitation 0.1 270 < th dose dependent rect. 6 20
31 174.11 wind 7.0 90 < th dose dependent rect. 3 6
33 174.21 radiation 40.0 270 < th dose dependent rect. 2 4
34 174.25 temperature 25.0 270 < th dose independent rect. 3 2
63 175.87 precipitation 0.1 270 < th dose independent rect. 1 6
64 175.87 precipitation 0.1 270 < th dose dependent rect. 1 6
105 178.55 temperature 10.0 270 > th dose dependent rect. 3 3
111 179.92 wind 9.0 270 < th dose independent rect. 7 18
114 180.20 wind 7.0 270 < th dose independent rect. 1 6
116 180.32 radiation 20.0 270 < th dose independent rect. 1 6
119 180.39 humidity 70.0 270 > th dose independent rect. 1 6
122 180.42 temperature 10.0 270 > th dose independent rect. 1 6
124 180.42 temperature 30.0 270 < th dose independent rect. 1 6
125 180.42 humidity 50.0 270 > th dose independent rect. 1 6
127 180.42 atmosphere 995.0 270 > th dose independent rect. 1 6
128 180.42 atmosphere 1015.0 270 < th dose independent rect. 1 6
130 180.42 temperature 10.0 270 > th dose independent rect. 7 18
136 180.86 precipitation 0.1 270 < th dose independent rect. 7 18
137 180.86 precipitation 0.1 270 < th dose dependent rect. 7 18
236 187.07 atmosphere 1015.0 270 < th dose dependent rect. 3 2
273 188.74 temperature 10.0 90 > th dose dependent rect. 8 19
311 191.72 atmosphere 995.0 270 > th dose independent rect. 6 20
341 192.62 radiation 30.0 270 < th dose independent rect. 15 15
351 193.12 humidity 50.0 270 > th dose independent rect. 21 14
353 193.21 wind 9.0 270 < th dose independent rect. 21 14
357 193.47 temperature 10.0 270 > th dose independent rect. 11 10
358 193.47 temperature 10.0 270 > th dose independent rect. 21 14
359 193.47 atmosphere 995.0 270 > th dose independent rect. 21 14
384 193.90 radiation 40.0 270 < th dose dependent rect. 15 15
418 194.29 atmosphere 995.0 90 > th dose independent rect. 8 19
423 194.52 precipitation 0.1 270 < th dose independent rect. 2 17
424 194.52 precipitation 0.1 270 < th dose dependent rect. 2 17
437 194.86 wind 1.0 270 > th dose independent rect. 6 20
471 195.42 temperature 10.0 270 > th dose dependent rect. 21 4
536 196.20 wind 9.0 270 < th dose independent rect. 6 9
538 196.30 precipitation 0.1 270 < th dose independent rect. 6 9
539 196.30 precipitation 0.1 270 < th dose dependent rect. 6 9
540 196.32 temperature 10.0 270 > th dose independent rect. 6 9
541 196.32 atmosphere 1015.0 270 < th dose independent rect. 6 9
542 196.32 temperature 10.0 270 > th dose independent rect. 15 15
543 196.35 precipitation 0.1 270 < th dose independent rect. 19 7
544 196.35 precipitation 0.1 270 < th dose dependent rect. 19 7
551 196.56 atmosphere 1015.0 270 < th dose independent rect. 11 10
556 196.73 humidity 50.0 270 > th dose independent rect. 14 16
558 196.78 wind 1.0 270 > th dose independent rect. 7 18
560 196.90 atmosphere 1015.0 270 < th dose independent rect. 6 20
561 196.91 humidity 60.0 270 > th dose independent rect. 19 7
562 196.93 radiation 1.0 270 < th dose dependent rect. 19 7
563 196.94 temperature 10.0 270 > th dose independent rect. 19 7
564 196.94 temperature 30.0 270 < th dose independent rect. 19 7
566 196.94 atmosphere 995.0 270 > th dose independent rect. 19 7
567 196.94 radiation 1.0 270 < th dose independent rect. 19 7
572 196.94 temperature 10.0 270 > th dose independent rect. 2 17
573 196.94 atmosphere 1015.0 270 < th dose independent rect. 2 17
581 196.95 wind 9.0 270 < th dose independent rect. 19 7
588 197.30 atmosphere 995.0 270 > th dose independent rect. 6 9
615 197.66 wind 9.0 270 < th dose independent rect. 15 15
618 197.83 precipitation 0.1 270 < th dose independent rect. 1 20
619 197.83 precipitation 0.1 270 < th dose dependent rect. 1 20
627 198.06 precipitation 0.1 270 < th dose independent rect. 15 15
629 198.06 precipitation 0.1 270 < th dose dependent rect. 15 15
630 198.09 temperature 15.0 270 > th dose independent rect. 1 20
631 198.13 precipitation 0.1 270 < th dose independent rect. 21 4
633 198.13 atmosphere 1015.0 270 < th dose independent rect. 7 18
634 198.13 precipitation 0.1 270 < th dose dependent rect. 21 4
643 198.35 wind 1.0 270 > th dose independent rect. 11 10
645 198.43 wind 9.0 270 < th dose independent rect. 11 10
647 198.50 temperature 10.0 270 > th dose dependent rect. 20 6
650 198.60 humidity 50.0 270 > th dose independent rect. 6 9
685 199.02 radiation 1.0 270 < th dose dependent rect. 21 4
686 199.03 temperature 10.0 270 > th dose independent rect. 21 4
687 199.03 temperature 30.0 270 < th dose independent rect. 21 4
688 199.03 humidity 50.0 270 > th dose independent rect. 21 4
691 199.03 atmosphere 995.0 270 > th dose independent rect. 21 4
692 199.03 radiation 1.0 270 < th dose independent rect. 21 4
702 199.05 wind 9.0 270 < th dose independent rect. 21 4
715 199.29 atmosphere 1015.0 30 < th dose dependent rect. 4 5
718 199.38 wind 9.0 270 < th dose independent rect. 2 17
745 199.87 precipitation 0.1 270 < th dose independent rect. 11 10
747 199.87 precipitation 0.1 270 < th dose dependent rect. 11 10
748 199.89 atmosphere 995.0 270 > th dose independent rect. 15 15
752 200.02 atmosphere 995.0 270 > th dose independent rect. 2 17
759 200.22 wind 9.0 90 < th dose dependent rect. 8 19
765 200.37 humidity 50.0 270 > th dose dependent rect. 21 4
769 200.40 wind 9.0 270 < th dose dependent rect. 21 4
772 200.50 radiation 1.0 270 < th dose dependent rect. 2 17
804 200.81 atmosphere 1015.0 270 < th dose independent rect. 1 20
820 201.10 precipitation 0.1 270 < th dose independent rect. 21 14
822 201.10 precipitation 0.1 270 < th dose dependent rect. 21 14
845 201.84 radiation 1.0 270 < th dose independent rect. 2 17
849 201.90 wind 9.0 270 < th dose independent rect. 1 20
854 202.05 radiation 1.0 270 < th dose dependent rect. 3 14
900 202.59 temperature 10.0 90 > th dose independent rect. 4 17
901 202.59 atmosphere 1015.0 90 < th dose independent rect. 4 17
947 203.40 temperature 30.0 270 < th dose dependent rect. 3 2
961 203.85 atmosphere 995.0 270 > th dose independent rect. 1 20