Os05g0156800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF625 domain containing protein.
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Os05g0156800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF625 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.61 | 0.264 | 11 | -0.717 | 0.847 | 0.19 | 0.00217 | 2.18 | 0.123 | 15.5 | 29.9 | 1589 | -- | -- |
| 32.14 | 0.264 | 10.9 | -0.299 | 0.846 | 0.419 | 0.0813 | -- | 0.178 | 15.6 | 29.7 | 1529 | -- | -- |
| 31.61 | 0.262 | 11 | -0.717 | 0.847 | 0.19 | -- | 2.18 | 0.123 | 15.5 | 29.9 | 1587 | -- | -- |
| 32.07 | 0.264 | 10.9 | -0.303 | 0.852 | 0.415 | -- | -- | 0.175 | 15.5 | 29.79 | 1528 | -- | -- |
| 69.48 | 0.388 | 11 | -0.874 | -- | 0.226 | -- | 2.42 | 0.0848 | -- | 29.5 | 2676 | -- | -- |
| 39.41 | 0.294 | 10.9 | -0.426 | 0.868 | -- | 0.0571 | -- | 0.209 | 15.5 | -- | -- | -- | -- |
| 39.42 | 0.294 | 10.9 | -0.425 | 0.869 | -- | -- | -- | 0.209 | 15.5 | -- | -- | -- | -- |
| 68.82 | 0.386 | 10.9 | -0.297 | -- | 0.511 | -- | -- | 0.241 | -- | 29.27 | 1249 | -- | -- |
| 34.29 | 0.273 | 10.9 | -- | 0.855 | 0.463 | -- | -- | 0.206 | 15.5 | 29.8 | 1525 | -- | -- |
| 81.72 | 0.422 | 10.9 | -0.462 | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
| 44.19 | 0.311 | 10.9 | -- | 0.877 | -- | -- | -- | 0.257 | 15.5 | -- | -- | -- | -- |
| 69.22 | 0.388 | 10.9 | -- | -- | 0.664 | -- | -- | 0.369 | -- | 27.6 | 1229 | -- | -- |
| 87.35 | 0.436 | 10.9 | -- | -- | -- | -- | -- | 0.238 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 4 | 31.81 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 6 | 31.82 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 14 | 31.82 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 18 |
| 51 | 31.87 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 52 | 31.88 | temperature | 30.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 55 | 31.88 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 69 | 31.88 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 120 | 31.97 | temperature | 30.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 123 | 31.98 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 192 | 32.07 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 193 | 32.07 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 21 |
| 196 | 32.07 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 23 |
| 199 | 32.08 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 317 | 32.11 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 336 | 32.11 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 23 |
| 393 | 32.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 396 | 32.15 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 420 | 32.18 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 543 | 32.19 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 546 | 32.19 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 567 | 32.21 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 568 | 32.21 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 633 | 32.25 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 641 | 32.25 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 644 | 32.26 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 657 | 32.26 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 666 | 32.27 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 706 | 32.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 728 | 32.32 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 756 | 32.33 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 12 |
| 795 | 32.36 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 807 | 32.38 | radiation | 40.0 | 720 | < th | dose independent | rect. | 5 | 6 |
| 856 | 32.41 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 18 | 15 |
| 974 | 32.49 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 978 | 32.49 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 984 | 32.50 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 986 | 32.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |