Os05g0156300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein disulfide isomerase.
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Os05g0156300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein disulfide isomerase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.52 | 0.272 | 13.3 | 0.246 | 0.95 | 0.553 | -0.894 | -2.32 | 0.336 | 16.7 | 93.68 | 315 | -- | -- |
| 36.58 | 0.282 | 13.3 | 0.205 | 0.957 | 0.9 | -0.366 | -- | 0.311 | 16.7 | 94.67 | 232 | -- | -- |
| 35.12 | 0.276 | 13.3 | 0.229 | 0.959 | 0.624 | -- | -1.62 | 0.334 | 16.8 | 93.76 | 328 | -- | -- |
| 36.94 | 0.283 | 13.3 | 0.2 | 0.967 | 0.895 | -- | -- | 0.314 | 16.8 | 94.59 | 230 | -- | -- |
| 64.29 | 0.373 | 13.3 | 0.26 | -- | -0.372 | -- | -0.509 | 0.106 | -- | 77.43 | 348 | -- | -- |
| 39.72 | 0.295 | 13.3 | 0.215 | 0.86 | -- | -0.439 | -- | 0.276 | 16.6 | -- | -- | -- | -- |
| 40.22 | 0.297 | 13.3 | 0.212 | 0.858 | -- | -- | -- | 0.274 | 16.6 | -- | -- | -- | -- |
| 54.92 | 0.345 | 13.3 | 0.215 | -- | -0.72 | -- | -- | 0.197 | -- | 68 | 293 | -- | -- |
| 37.99 | 0.287 | 13.3 | -- | 0.958 | 0.86 | -- | -- | 0.303 | 16.8 | 94.57 | 220 | -- | -- |
| 79.39 | 0.416 | 13.3 | 0.18 | -- | -- | -- | -- | 0.251 | -- | -- | -- | -- | -- |
| 41.41 | 0.301 | 13.3 | -- | 0.854 | -- | -- | -- | 0.25 | 16.6 | -- | -- | -- | -- |
| 56.18 | 0.349 | 13.3 | -- | -- | -0.724 | -- | -- | 0.181 | -- | 67.05 | 301 | -- | -- |
| 80.24 | 0.418 | 13.3 | -- | -- | -- | -- | -- | 0.232 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.45 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 33.45 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 34.25 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 11 | 34.90 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 12 | 34.90 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 23 | 35.04 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 24 | 35.05 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 25 | 35.06 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 28 | 35.10 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 31 | 35.15 | temperature | 20.0 | 270 | < th | dose independent | rect. | 17 | 12 |
| 39 | 35.23 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 11 |
| 42 | 35.27 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 8 |
| 53 | 35.32 | temperature | 20.0 | 270 | < th | dose independent | sin | 13 | NA |
| 55 | 35.33 | humidity | 90.0 | 10 | > th | dose independent | rect. | 1 | 11 |
| 63 | 35.38 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 68 | 35.39 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 14 |
| 70 | 35.40 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 1 | 11 |
| 74 | 35.41 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 96 | 35.45 | humidity | 90.0 | 10 | > th | dose independent | sin | 3 | NA |
| 100 | 35.46 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 147 | 35.56 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 152 | 35.57 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 169 | 35.61 | humidity | 90.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 176 | 35.63 | humidity | 90.0 | 30 | > th | dose dependent | sin | 2 | NA |
| 189 | 35.66 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 24 | 9 |
| 194 | 35.67 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 247 | 35.75 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 251 | 35.76 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 256 | 35.77 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 13 |
| 275 | 35.79 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 286 | 35.80 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 1 | 9 |
| 288 | 35.81 | temperature | 25.0 | 10 | < th | dose independent | rect. | 24 | 11 |
| 328 | 35.86 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 332 | 35.87 | temperature | 25.0 | 10 | > th | dose independent | sin | 5 | NA |
| 354 | 35.90 | temperature | 20.0 | 720 | < th | dose independent | rect. | 13 | 12 |
| 362 | 35.91 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 370 | 35.93 | humidity | 90.0 | 10 | > th | dose independent | rect. | 1 | 8 |
| 399 | 35.95 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 440 | 35.99 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 444 | 36.00 | temperature | 20.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 456 | 36.01 | temperature | 25.0 | 10 | < th | dose independent | sin | 5 | NA |
| 457 | 36.01 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 479 | 36.02 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 511 | 36.05 | temperature | 20.0 | 10 | < th | dose independent | rect. | 18 | 15 |
| 514 | 36.05 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 9 |
| 529 | 36.07 | temperature | 20.0 | 10 | < th | dose independent | rect. | 18 | 12 |
| 538 | 36.08 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 543 | 36.08 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 582 | 36.14 | temperature | 20.0 | 10 | < th | dose independent | sin | 12 | NA |
| 584 | 36.14 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 4 |
| 636 | 36.18 | wind | 5.0 | 720 | < th | dose independent | rect. | 15 | 20 |
| 638 | 36.18 | humidity | 90.0 | 270 | > th | dose dependent | no | NA | NA |
| 655 | 36.19 | wind | 5.0 | 720 | > th | dose dependent | rect. | 14 | 20 |
| 657 | 36.20 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 19 | 6 |
| 660 | 36.20 | temperature | 20.0 | 10 | < th | dose independent | rect. | 16 | 17 |
| 680 | 36.22 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 687 | 36.22 | temperature | 20.0 | 10 | < th | dose independent | rect. | 16 | 14 |
| 700 | 36.23 | wind | 5.0 | 720 | > th | dose independent | rect. | 14 | 20 |
| 701 | 36.23 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 22 |
| 706 | 36.23 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 22 | 9 |
| 712 | 36.23 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 717 | 36.24 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 722 | 36.24 | wind | 5.0 | 720 | < th | dose independent | rect. | 15 | 14 |
| 736 | 36.25 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 9 |
| 754 | 36.26 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 12 |
| 761 | 36.26 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 20 | 13 |
| 785 | 36.28 | wind | 5.0 | 720 | > th | dose independent | rect. | 14 | 22 |
| 803 | 36.29 | temperature | 20.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 804 | 36.29 | wind | 5.0 | 720 | > th | dose independent | rect. | 20 | 22 |
| 805 | 36.29 | wind | 5.0 | 720 | < th | dose independent | rect. | 17 | 22 |
| 815 | 36.30 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 8 |
| 862 | 36.32 | wind | 5.0 | 720 | > th | dose independent | rect. | 11 | 17 |
| 864 | 36.32 | wind | 5.0 | 720 | > th | dose independent | rect. | 7 | 21 |
| 867 | 36.32 | wind | 5.0 | 720 | > th | dose independent | rect. | 11 | 22 |
| 875 | 36.32 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 883 | 36.33 | wind | 7.0 | 720 | < th | dose independent | rect. | 17 | 18 |
| 884 | 36.33 | wind | 5.0 | 720 | > th | dose independent | rect. | 9 | 19 |
| 889 | 36.33 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 6 |
| 945 | 36.36 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 947 | 36.36 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 9 |
| 977 | 36.37 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 1000 | 36.38 | wind | 5.0 | 720 | > th | dose independent | rect. | 14 | 14 |