Os05g0154700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Kinesin heavy chain (Fragment).
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Os05g0154700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Kinesin heavy chain (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.32 | 0.254 | 11 | 0.313 | 0.4 | 0.582 | -0.547 | 0.649 | 0.152 | 4.66 | 21.41 | 1400 | -- | -- |
| 29.96 | 0.255 | 11 | 0.174 | 0.401 | 0.49 | -0.532 | -- | 0.124 | 5.1 | 21.9 | 1106 | -- | -- |
| 30.09 | 0.255 | 11 | 0.307 | 0.397 | 0.584 | -- | 0.622 | 0.152 | 4.52 | 21.43 | 1414 | -- | -- |
| 30.73 | 0.258 | 11 | 0.1 | 0.39 | 0.584 | -- | -- | 0.0934 | 4.72 | 21.5 | 2130 | -- | -- |
| 38.32 | 0.288 | 11 | 0.301 | -- | 0.607 | -- | 0.573 | 0.152 | -- | 21.43 | 1327 | -- | -- |
| 38.56 | 0.291 | 11 | 0.364 | 0.419 | -- | -0.559 | -- | 0.268 | 4.55 | -- | -- | -- | -- |
| 39.39 | 0.294 | 11 | 0.368 | 0.415 | -- | -- | -- | 0.271 | 4.43 | -- | -- | -- | -- |
| 38.76 | 0.29 | 11 | 0.185 | -- | 0.511 | -- | -- | 0.105 | -- | 22 | 1177 | -- | -- |
| 30.93 | 0.259 | 11 | -- | 0.417 | 0.585 | -- | -- | 0.0845 | 4.83 | 21.6 | 2121 | -- | -- |
| 48.61 | 0.326 | 11 | 0.384 | -- | -- | -- | -- | 0.282 | -- | -- | -- | -- | -- |
| 42.96 | 0.307 | 11 | -- | 0.422 | -- | -- | -- | 0.23 | 4.41 | -- | -- | -- | -- |
| 39.3 | 0.292 | 11 | -- | -- | 0.589 | -- | -- | 0.104 | -- | 21.6 | 2549 | -- | -- |
| 52.5 | 0.338 | 11 | -- | -- | -- | -- | -- | 0.239 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 2 | 29.37 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 71 | 29.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 99 | 29.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 115 | 29.90 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 180 | 30.07 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 300 | 30.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 362 | 30.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 20 |
| 461 | 30.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 526 | 30.52 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 543 | 30.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 595 | 30.63 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 606 | 30.63 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 609 | 30.63 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 610 | 30.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 675 | 30.72 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 700 | 30.75 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 705 | 30.75 | temperature | 20 | 30 | > th | dose dependent | rect. | 12 | 21 |
| 735 | 30.78 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 803 | 30.82 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 820 | 30.83 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 6 |
| 941 | 30.90 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |