Os05g0152400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 14 protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0152400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glycosyl transferase, family 14 protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.53 | 0.395 | 9.39 | -1.01 | 0.442 | -0.781 | 1.01 | 1.89 | -0.37 | 8.08 | 13.62 | 1536 | -- | -- |
| 75.4 | 0.404 | 9.37 | -0.787 | 0.444 | -0.815 | 0.861 | -- | -0.296 | 7.55 | 11.67 | 1579 | -- | -- |
| 73.48 | 0.399 | 9.39 | -0.977 | 0.461 | -0.747 | -- | 1.76 | -0.361 | 8.01 | 17.9 | 1574 | -- | -- |
| 77.46 | 0.41 | 9.37 | -0.788 | 0.449 | -0.774 | -- | -- | -0.304 | 7.9 | 13.17 | 1577 | -- | -- |
| 83.85 | 0.426 | 9.38 | -0.922 | -- | -0.859 | -- | 1.76 | -0.34 | -- | 11.28 | 1546 | -- | -- |
| 88.69 | 0.441 | 9.33 | -0.754 | 0.524 | -- | 0.57 | -- | -0.153 | 8.9 | -- | -- | -- | -- |
| 89.7 | 0.444 | 9.33 | -0.733 | 0.52 | -- | -- | -- | -0.151 | 9.2 | -- | -- | -- | -- |
| 86.99 | 0.434 | 9.38 | -0.802 | -- | -1 | -- | -- | -0.307 | -- | 6.48 | 1544 | -- | -- |
| 91.58 | 0.446 | 9.36 | -- | 0.42 | -0.805 | -- | -- | -0.212 | 7.67 | 10 | 1578 | -- | -- |
| 105.36 | 0.48 | 9.35 | -0.735 | -- | -- | -- | -- | -0.149 | -- | -- | -- | -- | -- |
| 103.88 | 0.477 | 9.32 | -- | 0.52 | -- | -- | -- | -0.0697 | 9.3 | -- | -- | -- | -- |
| 101.07 | 0.468 | 9.36 | -- | -- | -0.922 | -- | -- | -0.207 | -- | 10 | 1560 | -- | -- |
| 119.62 | 0.51 | 9.33 | -- | -- | -- | -- | -- | -0.0672 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.56 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 20 |
| 3 | 66.67 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 5 |
| 4 | 66.72 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 9 |
| 5 | 66.72 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 15 |
| 6 | 66.72 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 17 |
| 9 | 66.73 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 11 |
| 23 | 66.89 | radiation | 10 | 1440 | < th | dose dependent | sin | 20 | NA |
| 103 | 68.10 | radiation | 10 | 1440 | < th | dose independent | rect. | 12 | 5 |
| 114 | 68.49 | radiation | 10 | 1440 | < th | dose independent | rect. | 12 | 13 |
| 116 | 68.50 | radiation | 10 | 1440 | < th | dose independent | rect. | 12 | 9 |
| 205 | 69.12 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 17 |
| 208 | 69.13 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 15 |
| 217 | 69.27 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 13 |
| 235 | 69.47 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 240 | 69.51 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 11 |
| 255 | 69.57 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 259 | 69.60 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 291 | 69.87 | radiation | 10 | 1440 | < th | dose independent | sin | 17 | NA |
| 322 | 70.03 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 370 | 70.24 | humidity | 70 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 382 | 70.38 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 450 | 70.79 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 473 | 70.83 | humidity | 80 | 1440 | > th | dose independent | rect. | 21 | 20 |
| 490 | 70.87 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 509 | 70.93 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 22 |
| 545 | 71.05 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 598 | 71.25 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 704 | 71.55 | humidity | 90 | 1440 | < th | dose dependent | rect. | 20 | 21 |
| 722 | 71.58 | humidity | 50 | 1440 | > th | dose dependent | rect. | 2 | 15 |
| 742 | 71.62 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 745 | 71.62 | radiation | 20 | 1440 | < th | dose dependent | rect. | 24 | 19 |
| 747 | 71.63 | radiation | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 770 | 71.64 | humidity | 60 | 720 | > th | dose dependent | sin | 14 | NA |
| 918 | 71.79 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 20 |
| 956 | 71.87 | humidity | 50 | 1440 | > th | dose dependent | rect. | 20 | 21 |
| 958 | 71.88 | humidity | 90 | 1440 | < th | dose dependent | sin | 1 | NA |