Os05g0151100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0151100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 201.5 | 0.667 | 3.04 | -0.34 | 0.184 | 0.22 | -1.46 | -1.81 | -0.157 | 7.44 | 88 | 686 | -- | -- |
| 208.35 | 0.672 | 3.05 | -0.193 | 0.206 | 0.239 | -0.457 | -- | -0.129 | 8.19 | 88 | 664 | -- | -- |
| 203.45 | 0.664 | 3.04 | -0.38 | 0.0536 | 0.327 | -- | -1.91 | -0.158 | 7.62 | 87.93 | 1277 | -- | -- |
| 208.81 | 0.673 | 3.05 | -0.197 | 0.204 | 0.24 | -- | -- | -0.138 | 8.37 | 87.98 | 664 | -- | -- |
| 203.59 | 0.665 | 3.04 | -0.366 | -- | 0.311 | -- | -1.98 | -0.153 | -- | 87.95 | 1277 | -- | -- |
| 209.17 | 0.678 | 3.05 | -0.224 | 0.0581 | -- | -0.677 | -- | -0.11 | 5.83 | -- | -- | -- | -- |
| 210.21 | 0.679 | 3.05 | -0.227 | 0.0668 | -- | -- | -- | -0.106 | 8.18 | -- | -- | -- | -- |
| 209.19 | 0.674 | 3.06 | -0.191 | -- | 0.273 | -- | -- | -0.135 | -- | 87.37 | 1396 | -- | -- |
| 209.83 | 0.675 | 3.05 | -- | 0.218 | 0.266 | -- | -- | -0.121 | 8.44 | 87.44 | 664 | -- | -- |
| 210.45 | 0.678 | 3.05 | -0.227 | -- | -- | -- | -- | -0.106 | -- | -- | -- | -- | -- |
| 211.57 | 0.68 | 3.04 | -- | 0.0657 | -- | -- | -- | -0.0811 | 8.43 | -- | -- | -- | -- |
| 210.13 | 0.675 | 3.05 | -- | -- | 0.311 | -- | -- | -0.119 | -- | 87.26 | 1396 | -- | -- |
| 211.81 | 0.679 | 3.05 | -- | -- | -- | -- | -- | -0.0805 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 185.46 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 6 |
| 3 | 188.56 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 9 | 190.21 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 11 | 190.21 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 13 | 190.39 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 30 | 190.39 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 55 | 196.41 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 56 | 196.78 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 66 | 196.78 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 76 | 197.63 | wind | 9.0 | 90 | > th | dose dependent | rect. | 12 | 3 |
| 77 | 197.69 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 3 |
| 81 | 197.77 | wind | 9.0 | 90 | > th | dose independent | rect. | 12 | 3 |
| 82 | 197.86 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 94 | 197.86 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 114 | 198.05 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 1 | 1 |
| 122 | 198.24 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 24 | 6 |
| 124 | 198.53 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 23 | 4 |
| 125 | 198.56 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 21 | 10 |
| 130 | 198.71 | wind | 3.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 131 | 198.75 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 23 | 9 |
| 135 | 198.85 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 22 | 6 |
| 144 | 198.89 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 161 | 198.99 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 166 | 199.03 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 24 | 3 |
| 186 | 199.27 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 2 |
| 191 | 199.30 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 193 | 199.33 | radiation | 20.0 | 10 | < th | dose independent | rect. | 11 | 14 |
| 202 | 199.40 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 20 | 12 |
| 205 | 199.42 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 215 | 199.47 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 225 | 199.59 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 228 | 199.61 | humidity | 90.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 235 | 199.64 | wind | 3.0 | 10 | < th | dose dependent | rect. | 1 | 12 |
| 254 | 199.74 | wind | 1.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 268 | 199.83 | wind | 3.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 274 | 199.86 | humidity | 80.0 | 720 | < th | dose independent | rect. | 5 | 1 |
| 292 | 199.92 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 14 |
| 294 | 199.94 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 14 |
| 316 | 200.01 | radiation | 10.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 342 | 200.18 | humidity | 90.0 | 720 | < th | dose independent | rect. | 2 | 1 |
| 349 | 200.26 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 7 |
| 352 | 200.28 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 7 |
| 367 | 200.35 | wind | 3.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 369 | 200.36 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 4 |
| 375 | 200.38 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 381 | 200.40 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 3 |
| 382 | 200.40 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 4 |
| 407 | 200.42 | wind | 3.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 409 | 200.42 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 504 | 200.54 | wind | 3.0 | 1440 | < th | dose independent | rect. | 19 | 7 |
| 515 | 200.56 | wind | 1.0 | 720 | > th | dose dependent | rect. | 20 | 2 |
| 545 | 200.60 | wind | 3.0 | 1440 | > th | dose independent | rect. | 18 | 8 |
| 546 | 200.61 | wind | 3.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 548 | 200.61 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 5 |
| 550 | 200.62 | humidity | 90.0 | 720 | > th | dose independent | rect. | 1 | 1 |
| 590 | 200.73 | wind | 3.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 597 | 200.77 | radiation | 10.0 | 10 | > th | dose independent | rect. | 8 | 7 |
| 598 | 200.77 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 616 | 200.82 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 637 | 200.89 | humidity | 70.0 | 10 | < th | dose independent | rect. | 18 | 14 |
| 668 | 200.96 | temperature | 25.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 680 | 200.99 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 683 | 201.00 | humidity | 80.0 | 10 | < th | dose independent | rect. | 1 | 5 |
| 689 | 201.01 | humidity | 90.0 | 720 | < th | dose independent | rect. | 21 | 10 |
| 714 | 201.04 | radiation | 40.0 | 90 | < th | dose independent | rect. | 10 | 16 |
| 753 | 201.08 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 2 |
| 754 | 201.08 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 846 | 201.22 | radiation | 10.0 | 90 | > th | dose independent | rect. | 8 | 10 |
| 853 | 201.22 | radiation | 40.0 | 270 | < th | dose independent | rect. | 22 | 14 |
| 915 | 201.30 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 945 | 201.35 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 962 | 201.38 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 7 | 1 |