Os05g0149300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 1-aminocyclopropane-1-carboxylate oxidase.
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Os05g0149300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 1-aminocyclopropane-1-carboxylate oxidase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 614.53 | 1.16 | 4.45 | -1.58 | 1.45 | 2.28 | -0.0159 | -5.25 | -1.4 | 5.2 | 19.32 | 598 | -- | -- |
| 629.34 | 1.17 | 4.32 | -0.57 | 1.42 | 2.54 | 1.01 | -- | -1.1 | 5.14 | 14.62 | 582 | -- | -- |
| 614.39 | 1.15 | 4.45 | -1.55 | 1.46 | 2.29 | -- | -5.13 | -1.39 | 5.16 | 19 | 585 | -- | -- |
| 631.79 | 1.17 | 4.32 | -0.547 | 1.4 | 2.5 | -- | -- | -1.1 | 5.14 | 13.9 | 592 | -- | -- |
| 659.48 | 1.2 | 4.48 | -1.6 | -- | 2.3 | -- | -4.77 | -1.37 | -- | 9.916 | 1192 | -- | -- |
| 705.01 | 1.24 | 4.25 | 0.0589 | 0.935 | -- | 0.611 | -- | -0.721 | 3.6 | -- | -- | -- | -- |
| 706.15 | 1.24 | 4.26 | 0.0489 | 0.938 | -- | -- | -- | -0.725 | 3.62 | -- | -- | -- | -- |
| 671.3 | 1.21 | 4.35 | -0.586 | -- | 2.23 | -- | -- | -1.1 | -- | 8.765 | 1179 | -- | -- |
| 638.78 | 1.18 | 4.3 | -- | 1.34 | 2.25 | -- | -- | -1.01 | 5.03 | 13.1 | 585 | -- | -- |
| 755.1 | 1.28 | 4.26 | 0.0882 | -- | -- | -- | -- | -0.7 | -- | -- | -- | -- | -- |
| 706.22 | 1.24 | 4.26 | -- | 0.939 | -- | -- | -- | -0.73 | 3.62 | -- | -- | -- | -- |
| 679.21 | 1.21 | 4.32 | -- | -- | 1.99 | -- | -- | -0.996 | -- | 12.51 | 1177 | -- | -- |
| 755.3 | 1.28 | 4.26 | -- | -- | -- | -- | -- | -0.71 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 597.72 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 2 | 601.17 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 8 | 603.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 10 | 604.53 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 22 | 606.43 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 44 | 607.78 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 46 | 608.01 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 20 |
| 47 | 608.18 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 64 | 609.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 73 | 609.40 | humidity | 90 | 14400 | > th | dose dependent | sin | 17 | NA |
| 79 | 609.63 | humidity | 80 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 83 | 609.77 | humidity | 80 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 84 | 609.78 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 103 | 610.23 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 119 | 610.73 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 130 | 610.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 133 | 611.06 | humidity | 80 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 156 | 611.41 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 191 | 612.03 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 201 | 612.26 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 223 | 612.86 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 227 | 612.93 | humidity | 80 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 233 | 613.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 244 | 613.27 | humidity | 80 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 246 | 613.38 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 251 | 613.42 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 273 | 613.84 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 292 | 614.16 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 21 |
| 296 | 614.21 | humidity | 80 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 302 | 614.33 | humidity | 80 | 14400 | < th | dose independent | rect. | 11 | 9 |
| 306 | 614.35 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 21 |
| 309 | 614.42 | humidity | 80 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 336 | 614.83 | humidity | 80 | 14400 | > th | dose independent | rect. | 7 | 8 |
| 340 | 614.89 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 9 |
| 345 | 614.97 | humidity | 90 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 351 | 615.06 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 362 | 615.21 | humidity | 80 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 394 | 615.45 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 412 | 615.68 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 436 | 615.82 | humidity | 70 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 451 | 615.99 | wind | 5 | 14400 | < th | dose dependent | rect. | 7 | 6 |
| 454 | 616.01 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 455 | 616.04 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 15 |
| 476 | 616.20 | wind | 9 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 491 | 616.29 | wind | 1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 513 | 616.51 | humidity | 80 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 536 | 616.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 577 | 617.04 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 611 | 617.31 | wind | 1 | 14400 | > th | dose dependent | rect. | 7 | 5 |
| 620 | 617.36 | humidity | 70 | 14400 | > th | dose dependent | rect. | 11 | 8 |
| 628 | 617.41 | humidity | 90 | 14400 | > th | dose independent | sin | 17 | NA |
| 641 | 617.52 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 648 | 617.55 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 654 | 617.63 | humidity | 70 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 662 | 617.69 | temperature | 20 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 675 | 617.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 709 | 618.13 | radiation | 10 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 722 | 618.22 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 728 | 618.26 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 732 | 618.29 | humidity | 90 | 14400 | < th | dose independent | rect. | 12 | 11 |
| 737 | 618.32 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 741 | 618.34 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 764 | 618.50 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 787 | 618.63 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 794 | 618.69 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 798 | 618.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 817 | 618.91 | humidity | 80 | 14400 | > th | dose independent | sin | 0 | NA |
| 870 | 619.18 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 938 | 619.54 | humidity | 80 | 14400 | < th | dose independent | sin | 23 | NA |