Os05g0149200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PWWP domain containing protein.
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Os05g0149200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : PWWP domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.27 | 0.259 | 12.9 | 1.15 | 0.024 | -0.175 | 0.671 | 3.52 | 0.245 | 4.04 | 26.32 | 972 | -- | -- |
| 32.76 | 0.267 | 12.9 | 0.461 | 0.0608 | 0.156 | 0.689 | -- | 0.0884 | 3.34 | 24.4 | 6362 | -- | -- |
| 30.99 | 0.259 | 12.8 | 1.31 | 0.0779 | -0.23 | -- | 3.76 | 0.268 | 23.4 | 25.82 | 1081 | -- | -- |
| 33.12 | 0.268 | 12.9 | 0.473 | 0.0661 | 0.196 | -- | -- | 0.146 | 23.1 | 30.3 | 1245 | -- | -- |
| 31.36 | 0.261 | 12.9 | 1.27 | -- | -0.198 | -- | 3.69 | 0.256 | -- | 26.12 | 1088 | -- | -- |
| 33.39 | 0.271 | 12.9 | 0.547 | 0.0813 | -- | 0.655 | -- | 0.112 | 2.03 | -- | -- | -- | -- |
| 34.89 | 0.277 | 12.9 | 0.528 | 0.0932 | -- | -- | -- | 0.109 | 23.8 | -- | -- | -- | -- |
| 33.4 | 0.269 | 12.9 | 0.479 | -- | 0.2 | -- | -- | 0.149 | -- | 30.2 | 1215 | -- | -- |
| 38.83 | 0.29 | 12.9 | -- | 0.073 | 0.285 | -- | -- | 0.115 | 23.3 | 29.9 | 2772 | -- | -- |
| 35.43 | 0.278 | 12.9 | 0.531 | -- | -- | -- | -- | 0.11 | -- | -- | -- | -- | -- |
| 42.24 | 0.304 | 13 | -- | 0.1 | -- | -- | -- | 0.0501 | 0.132 | -- | -- | -- | -- |
| 39.03 | 0.291 | 13 | -- | -- | 0.292 | -- | -- | 0.0771 | -- | 30.1 | 6211 | -- | -- |
| 42.87 | 0.306 | 13 | -- | -- | -- | -- | -- | 0.0512 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.30 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 8 |
| 6 | 29.53 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 7 | 29.57 | wind | 5.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 8 | 29.62 | humidity | 70.0 | 90 | > th | dose independent | rect. | 18 | 10 |
| 11 | 29.66 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 13 | 29.69 | wind | 7.0 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 19 | 29.77 | wind | 7.0 | 30 | < th | dose dependent | rect. | 19 | 9 |
| 26 | 29.81 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 28 | 29.81 | wind | 1.0 | 720 | < th | dose dependent | rect. | 8 | 4 |
| 29 | 29.81 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 30 | 29.83 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 32 | 29.84 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 20 |
| 38 | 29.87 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 16 |
| 39 | 29.87 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 46 | 29.92 | wind | 5.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 50 | 29.93 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 3 |
| 51 | 29.93 | temperature | 25.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 55 | 29.95 | temperature | 15.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 56 | 29.95 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 65 | 29.98 | wind | 7.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 73 | 30.02 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 86 | 30.07 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 10 |
| 88 | 30.07 | radiation | 20.0 | 30 | < th | dose independent | rect. | 4 | 20 |
| 105 | 30.13 | wind | 1.0 | 720 | < th | dose independent | rect. | 8 | 4 |
| 107 | 30.13 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 111 | 30.14 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 15 |
| 115 | 30.14 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 118 | 30.15 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 120 | 30.15 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 9 |
| 121 | 30.15 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 9 |
| 127 | 30.15 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 130 | 30.15 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 135 | 30.15 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 159 | 30.19 | wind | 7.0 | 30 | < th | dose dependent | rect. | 17 | 11 |
| 172 | 30.21 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 13 |
| 183 | 30.22 | wind | 1.0 | 720 | < th | dose dependent | rect. | 8 | 15 |
| 184 | 30.22 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 196 | 30.23 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 222 | 30.26 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 225 | 30.26 | wind | 5.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 232 | 30.27 | wind | 5.0 | 30 | < th | dose dependent | rect. | 11 | 17 |
| 273 | 30.32 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 274 | 30.32 | wind | 7.0 | 10 | < th | dose dependent | rect. | 14 | 14 |
| 280 | 30.33 | radiation | 10.0 | 270 | < th | dose independent | rect. | 15 | 12 |
| 282 | 30.33 | temperature | 25.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 306 | 30.35 | humidity | 90.0 | 90 | < th | dose independent | rect. | 24 | 16 |
| 313 | 30.36 | temperature | 25.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 324 | 30.38 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 9 |
| 326 | 30.38 | wind | 5.0 | 30 | < th | dose independent | rect. | 14 | 14 |
| 334 | 30.38 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 355 | 30.40 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 20 |
| 375 | 30.42 | wind | 1.0 | 720 | < th | dose independent | rect. | 7 | 16 |
| 397 | 30.43 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 435 | 30.45 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 468 | 30.47 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 499 | 30.48 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 24 | 4 |
| 512 | 30.49 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 522 | 30.49 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 546 | 30.51 | temperature | 25.0 | 270 | < th | dose independent | sin | 14 | NA |
| 562 | 30.52 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 564 | 30.52 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 4 | 10 |
| 567 | 30.52 | wind | 1.0 | 30 | < th | dose dependent | rect. | 11 | 16 |
| 568 | 30.52 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 573 | 30.53 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 580 | 30.54 | wind | 1.0 | 720 | < th | dose independent | rect. | 7 | 8 |
| 592 | 30.54 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 22 | 5 |
| 602 | 30.55 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 617 | 30.55 | humidity | 50.0 | 720 | > th | dose independent | rect. | 24 | 18 |
| 629 | 30.56 | wind | 1.0 | 720 | < th | dose independent | rect. | 7 | 13 |
| 643 | 30.56 | wind | 1.0 | 720 | < th | dose dependent | rect. | 8 | 12 |
| 680 | 30.58 | temperature | 25.0 | 270 | > th | dose independent | sin | 11 | NA |
| 681 | 30.58 | humidity | 90.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 701 | 30.59 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 8 | 8 |
| 724 | 30.60 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 16 |
| 732 | 30.60 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 745 | 30.61 | wind | 3.0 | 30 | < th | dose independent | rect. | 11 | 17 |
| 747 | 30.61 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 751 | 30.61 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 755 | 30.61 | wind | 1.0 | 30 | < th | dose dependent | rect. | 13 | 14 |
| 769 | 30.62 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 19 | 9 |
| 777 | 30.63 | humidity | 90.0 | 270 | < th | dose independent | rect. | 23 | 13 |
| 807 | 30.64 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 838 | 30.65 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 23 | 2 |
| 886 | 30.68 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 896 | 30.68 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 922 | 30.69 | wind | 5.0 | 43200 | < th | dose independent | rect. | 22 | 6 |
| 960 | 30.71 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 24 | 4 |