Os05g0147500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S1C, HrtA/DegP2/Q/S family protein.
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Os05g0147500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S1C, HrtA/DegP2/Q/S family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.44 | 0.498 | 12.4 | -0.882 | 2.67 | -0.74 | -0.639 | 1.86 | -0.64 | 17.8 | 29.3 | 19 | -- | -- |
| 117.42 | 0.505 | 12.4 | -0.882 | 2.67 | -0.74 | -0.639 | -- | -0.64 | 17.8 | 29.3 | 76 | -- | -- |
| 112.7 | 0.494 | 12.4 | -0.888 | 2.65 | -0.722 | -- | 1.79 | -0.65 | 17.8 | 29.11 | 23 | -- | -- |
| 114.11 | 0.498 | 12.4 | -0.649 | 2.56 | -0.665 | -- | -- | -0.605 | 17.8 | 28.4 | 99 | -- | -- |
| 311.88 | 0.823 | 12.5 | -0.85 | -- | -1.98 | -- | 2.81 | -0.935 | -- | 27.45 | 358 | -- | -- |
| 133.64 | 0.542 | 12.4 | -0.51 | 2.89 | -- | -0.531 | -- | -0.522 | 17.5 | -- | -- | -- | -- |
| 134.34 | 0.543 | 12.4 | -0.508 | 2.88 | -- | -- | -- | -0.524 | 17.5 | -- | -- | -- | -- |
| 294.5 | 0.799 | 12.4 | -1.01 | -- | -2.01 | -- | -- | -1.06 | -- | 26.6 | 316 | -- | -- |
| 125.03 | 0.521 | 12.3 | -- | 2.61 | -0.597 | -- | -- | -0.499 | 17.7 | 28.7 | 108 | -- | -- |
| 566.84 | 1.11 | 12.3 | -0.605 | -- | -- | -- | -- | -0.595 | -- | -- | -- | -- | -- |
| 141.15 | 0.556 | 12.3 | -- | 2.89 | -- | -- | -- | -0.468 | 17.4 | -- | -- | -- | -- |
| 326.03 | 0.841 | 12.4 | -- | -- | -1.96 | -- | -- | -0.843 | -- | 26.97 | 323 | -- | -- |
| 576.48 | 1.12 | 12.3 | -- | -- | -- | -- | -- | -0.528 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.15 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 9 |
| 3 | 107.14 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 11 | 108.30 | temperature | 25.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 22 | 109.09 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 24 | 109.14 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 28 | 109.63 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 30 | 109.64 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 39 | 109.94 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 40 | 109.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 51 | 110.32 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 12 |
| 52 | 110.35 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 63 | 110.58 | temperature | 25.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 67 | 110.64 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 68 | 110.65 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 69 | 110.66 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 70 | 110.66 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 8 | 3 |
| 74 | 110.71 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 76 | 110.74 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 77 | 110.75 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 14 |
| 90 | 110.93 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 23 | 6 |
| 103 | 111.12 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 8 | 7 |
| 111 | 111.20 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 114 | 111.26 | temperature | 25.0 | 720 | > th | dose independent | rect. | 8 | 1 |
| 119 | 111.28 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 13 |
| 140 | 111.49 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 165 | 111.81 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 6 |
| 167 | 111.81 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 6 |
| 176 | 111.88 | wind | 7.0 | 30 | < th | dose independent | rect. | 23 | 6 |
| 180 | 111.91 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 21 |
| 182 | 111.91 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 21 |
| 196 | 112.06 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 8 |
| 202 | 112.09 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 23 | 6 |
| 215 | 112.14 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 6 |
| 216 | 112.14 | temperature | 30.0 | 30 | < th | dose independent | rect. | 23 | 6 |
| 217 | 112.14 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 6 |
| 220 | 112.14 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 6 |
| 221 | 112.14 | radiation | 1.0 | 30 | < th | dose independent | rect. | 23 | 6 |
| 226 | 112.14 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 228 | 112.14 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 18 |
| 242 | 112.24 | humidity | 50.0 | 10 | > th | dose independent | rect. | 8 | 21 |
| 256 | 112.32 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 23 | 6 |
| 283 | 112.36 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 18 |
| 284 | 112.36 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 285 | 112.37 | wind | 7.0 | 30 | < th | dose independent | rect. | 8 | 21 |
| 295 | 112.41 | wind | 5.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 300 | 112.44 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 343 | 112.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 345 | 112.69 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 349 | 112.71 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 361 | 112.76 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 363 | 112.76 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 364 | 112.76 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 366 | 112.76 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 368 | 112.76 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 21 |
| 372 | 112.77 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 3 |
| 373 | 112.77 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 375 | 112.78 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 383 | 112.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 18 |
| 386 | 112.87 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 408 | 112.95 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 411 | 112.96 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 424 | 112.98 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 13 |
| 438 | 113.01 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 466 | 113.21 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 547 | 113.51 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 551 | 113.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 555 | 113.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 560 | 113.58 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 628 | 113.79 | humidity | 70.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 706 | 114.15 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 23 | 20 |
| 707 | 114.16 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 708 | 114.16 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 710 | 114.16 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 712 | 114.17 | wind | 9.0 | 30 | < th | dose dependent | rect. | 23 | 6 |
| 745 | 114.31 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 754 | 114.34 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 21 |
| 771 | 114.43 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 831 | 114.62 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 838 | 114.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 840 | 114.65 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 878 | 114.74 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 17 |
| 893 | 114.80 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 19 | 13 |
| 894 | 114.80 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 923 | 114.90 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 928 | 114.92 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 933 | 114.93 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 5 | 18 |
| 951 | 115.00 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 953 | 115.01 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 958 | 115.03 | wind | 1.0 | 90 | > th | dose independent | rect. | 23 | 6 |
| 959 | 115.03 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 981 | 115.10 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 20 |
| 994 | 115.16 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 17 |
| 996 | 115.17 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 2 |