Os05g0145300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CRS1/YhbY domain containing protein.
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Os05g0145300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CRS1/YhbY domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 294.7 | 0.807 | 7.8 | 0.899 | 4.56 | 2.79 | -1.6 | -4.07 | -0.235 | 17.8 | 77.02 | 852 | 6.86 | -- |
| 308.09 | 0.818 | 7.8 | 0.877 | 4.45 | 2.66 | 0.0358 | -- | -0.218 | 17.5 | 78 | 856 | 7.81 | -- |
| 297.39 | 0.803 | 7.79 | 0.857 | 4.37 | 2.57 | -- | -2.77 | -0.22 | 17.7 | 77.02 | 865 | 7.17 | -- |
| 306.36 | 0.815 | 7.78 | 0.804 | 4.26 | 2.3 | -- | -- | -0.216 | 17.5 | 78 | 853 | 7.66 | -- |
| 740.31 | 1.27 | 7.69 | 0.669 | -- | -1.08 | -- | 0.675 | -0.16 | -- | 78.99 | 1324 | 6.09 | -- |
| 350.81 | 0.878 | 7.73 | 0.767 | 3.01 | -- | 0.556 | -- | -0.143 | 16.8 | -- | -- | -- | -- |
| 351.6 | 0.878 | 7.73 | 0.77 | 3.02 | -- | -- | -- | -0.14 | 16.8 | -- | -- | -- | -- |
| 361.8 | 0.89 | 7.68 | 0.852 | -- | -2.7 | -- | -- | -0.102 | -- | 66.03 | 1232 | 0.998 | -- |
| 322.73 | 0.837 | 7.8 | -- | 4.18 | 2.17 | -- | -- | -0.3 | 17.4 | 77.49 | 855 | 8.01 | -- |
| 832.61 | 1.35 | 7.7 | 0.657 | -- | -- | -- | -- | -0.218 | -- | -- | -- | -- | -- |
| 367.21 | 0.896 | 7.75 | -- | 3 | -- | -- | -- | -0.226 | 16.8 | -- | -- | -- | -- |
| 380.9 | 0.912 | 7.7 | -- | -- | -2.67 | -- | -- | -0.198 | -- | 66.03 | 1232 | 0.998 | -- |
| 843.98 | 1.36 | 7.72 | -- | -- | -- | -- | -- | -0.291 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 289.86 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 2 | 291.11 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 4 | 292.20 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 5 | 292.79 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 7 | 293.18 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 12 | 293.84 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 13 | 294.14 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 11 |
| 14 | 294.40 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 15 | 294.57 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 19 | 295.44 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 23 | 295.94 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 27 | 296.41 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 30 | 296.84 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 37 | 297.90 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 41 | 297.98 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 42 | 298.01 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 49 | 298.38 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 51 | 298.47 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 53 | 298.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 56 | 298.72 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 70 | 299.15 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 5 |
| 71 | 299.15 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 81 | 299.97 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 83 | 300.09 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 97 | 300.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 98 | 300.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 104 | 300.86 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 107 | 300.86 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 109 | 300.86 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 110 | 300.86 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 111 | 300.86 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 112 | 300.88 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 114 | 300.95 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 116 | 301.03 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 118 | 301.13 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 15 |
| 134 | 301.63 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 140 | 301.73 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 146 | 301.85 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 156 | 302.23 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 157 | 302.24 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 19 |
| 158 | 302.24 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 162 | 302.36 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 169 | 302.43 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 178 | 302.66 | humidity | 90.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 196 | 303.04 | humidity | 80.0 | 720 | < th | dose independent | rect. | 18 | 13 |
| 203 | 303.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 206 | 303.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 209 | 303.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 210 | 303.18 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 212 | 303.18 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 215 | 303.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 219 | 303.22 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 222 | 303.25 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 232 | 303.39 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 236 | 303.50 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 239 | 303.53 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 259 | 303.88 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 288 | 304.10 | humidity | 80.0 | 720 | > th | dose independent | rect. | 21 | 6 |
| 299 | 304.27 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 14 | 18 |
| 309 | 304.42 | temperature | 15.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 338 | 304.76 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 380 | 305.14 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 382 | 305.16 | temperature | 30.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 389 | 305.20 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 8 |
| 397 | 305.31 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 404 | 305.41 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 407 | 305.45 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 483 | 306.15 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 487 | 306.17 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 10 |
| 493 | 306.27 | humidity | 80.0 | 720 | > th | dose independent | sin | 12 | NA |
| 509 | 306.38 | humidity | 90.0 | 30 | < th | dose independent | rect. | 14 | 18 |
| 510 | 306.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 511 | 306.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 512 | 306.39 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 517 | 306.47 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 18 |
| 531 | 306.51 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 536 | 306.55 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 544 | 306.64 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 546 | 306.65 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 574 | 306.96 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 610 | 307.18 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 614 | 307.21 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 10 |
| 649 | 307.49 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 651 | 307.51 | temperature | 15.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 674 | 307.61 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 681 | 307.68 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 725 | 307.89 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 752 | 308.02 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 822 | 308.31 | humidity | 80.0 | 720 | < th | dose independent | sin | 13 | NA |
| 855 | 308.47 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 884 | 308.62 | humidity | 90.0 | 30 | < th | dose independent | rect. | 2 | 6 |
| 994 | 309.08 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 3 | 2 |