Os05g0143000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0143000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 366.62 | 0.9 | 3.31 | -0.465 | 0.243 | 1.92 | -0.313 | -21.2 | 0.117 | 9.25 | 0.6205 | 11 | 17.4 | -- |
| 400.05 | 0.932 | 3.33 | -0.342 | 0.231 | 0.979 | -0.737 | -- | 0.0259 | 7.95 | 0.663 | 8 | 15.6 | -- |
| 366.92 | 0.892 | 3.31 | -0.473 | 0.242 | 1.94 | -- | -21.4 | 0.119 | 9.51 | 0.6158 | 11 | 17.4 | -- |
| 400.15 | 0.932 | 3.3 | -0.347 | 0.271 | 1.11 | -- | -- | 0.096 | 9.48 | 0.6391 | 8 | 15.6 | -- |
| 370.29 | 0.896 | 3.31 | -0.474 | -- | 2.01 | -- | -21.5 | 0.12 | -- | 0.6131 | 11 | 17.3 | -- |
| 403.89 | 0.942 | 3.3 | -0.305 | 0.304 | -- | -0.84 | -- | 0.0685 | 8.09 | -- | -- | -- | -- |
| 405.73 | 0.943 | 3.3 | -0.326 | 0.307 | -- | -- | -- | 0.0708 | 8.97 | -- | -- | -- | -- |
| 405.25 | 0.938 | 3.3 | -0.35 | -- | 1.02 | -- | -- | 0.0869 | -- | 0.6458 | 8 | 15.7 | -- |
| 403.57 | 0.936 | 3.3 | -- | 0.303 | 1.04 | -- | -- | 0.0919 | 9.79 | 0.6412 | 8 | 15.7 | -- |
| 411.13 | 0.947 | 3.31 | -0.326 | -- | -- | -- | -- | 0.0728 | -- | -- | -- | -- | -- |
| 408.52 | 0.945 | 3.29 | -- | 0.307 | -- | -- | -- | 0.107 | 9.05 | -- | -- | -- | -- |
| 408.54 | 0.941 | 3.29 | -- | -- | 0.993 | -- | -- | 0.134 | -- | 0.6464 | 8 | 15.8 | -- |
| 413.93 | 0.95 | 3.3 | -- | -- | -- | -- | -- | 0.109 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 365.06 | wind | 1 | 10 | < th | dose dependent | rect. | 4 | 9 |
| 7 | 366.18 | wind | 1 | 10 | < th | dose independent | rect. | 5 | 8 |
| 15 | 367.35 | wind | 1 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 21 | 367.38 | wind | 1 | 10 | < th | dose independent | rect. | 5 | 5 |
| 36 | 369.29 | wind | 1 | 10 | < th | dose independent | rect. | 5 | 13 |
| 57 | 373.92 | wind | 1 | 10 | < th | dose dependent | sin | 0 | NA |
| 59 | 374.86 | wind | 1 | 10 | > th | dose independent | sin | 22 | NA |
| 79 | 376.12 | wind | 1 | 10 | < th | dose independent | sin | 23 | NA |
| 94 | 379.53 | radiation | 10 | 10 | < th | dose dependent | rect. | 10 | 3 |
| 96 | 379.64 | humidity | 60 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 117 | 380.67 | humidity | 60 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 125 | 380.83 | humidity | 60 | 4320 | > th | dose independent | rect. | 3 | 6 |
| 131 | 381.10 | humidity | 60 | 4320 | > th | dose independent | rect. | 20 | 13 |
| 134 | 381.36 | humidity | 60 | 1440 | < th | dose independent | rect. | 8 | 2 |
| 181 | 381.87 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 4 |
| 194 | 382.17 | radiation | 40 | 30 | > th | dose dependent | rect. | 14 | 21 |
| 195 | 382.23 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 2 |
| 214 | 382.34 | humidity | 60 | 270 | < th | dose dependent | rect. | 18 | 16 |
| 215 | 382.36 | wind | 9 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 217 | 382.36 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 220 | 382.42 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 17 |
| 248 | 382.56 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 9 |
| 255 | 382.60 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 260 | 382.66 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 16 |
| 307 | 382.86 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 4 |
| 321 | 383.14 | humidity | 60 | 270 | < th | dose independent | rect. | 18 | 16 |
| 396 | 383.56 | radiation | 40 | 30 | > th | dose independent | rect. | 14 | 21 |
| 412 | 383.62 | radiation | 40 | 30 | > th | dose independent | rect. | 9 | 2 |
| 432 | 383.66 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 9 |
| 439 | 383.70 | wind | 9 | 14400 | > th | dose dependent | rect. | 1 | 9 |
| 460 | 383.77 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 485 | 383.84 | humidity | 60 | 30 | < th | dose independent | rect. | 18 | 17 |
| 486 | 383.85 | radiation | 40 | 10 | > th | dose dependent | sin | 11 | NA |
| 502 | 383.99 | humidity | 80 | 30 | < th | dose dependent | rect. | 9 | 1 |
| 503 | 384.00 | humidity | 60 | 30 | < th | dose dependent | rect. | 18 | 17 |
| 507 | 384.04 | wind | 1 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 529 | 384.18 | radiation | 10 | 10 | < th | dose independent | rect. | 9 | 3 |
| 552 | 384.27 | humidity | 60 | 30 | < th | dose independent | rect. | 9 | 1 |
| 613 | 384.28 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 845 | 384.75 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 847 | 384.77 | radiation | 40 | 10 | > th | dose independent | sin | 11 | NA |
| 913 | 385.21 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 982 | 385.98 | wind | 9 | 14400 | > th | dose independent | rect. | 1 | 10 |
| 993 | 386.11 | radiation | 1 | 90 | < th | dose independent | rect. | 10 | 1 |
| 995 | 386.11 | radiation | 1 | 90 | < th | dose dependent | rect. | 10 | 1 |