Os05g0142600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os05g0142600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.7 | 0.516 | 8.77 | -0.642 | 1.17 | -1.55 | -0.101 | 3.76 | -0.694 | 21.2 | 29.3 | 593 | -- | -- |
| 119.97 | 0.51 | 8.73 | -0.271 | 1.12 | -1.27 | -0.457 | -- | -0.645 | 21.3 | 28.5 | 575 | -- | -- |
| 117.95 | 0.506 | 8.76 | -0.571 | 1.13 | -1.4 | -- | 2.5 | -0.725 | 21.3 | 28.6 | 593 | -- | -- |
| 119.86 | 0.51 | 8.73 | -0.242 | 1.11 | -1.19 | -- | -- | -0.663 | 21.3 | 28.1 | 578 | -- | -- |
| 175.32 | 0.617 | 8.78 | -0.501 | -- | -1.72 | -- | 1.5 | -0.749 | -- | 28.2 | 645 | -- | -- |
| 151.97 | 0.578 | 8.71 | 0.0176 | 1.67 | -- | 0.0141 | -- | -0.511 | 20.3 | -- | -- | -- | -- |
| 151.97 | 0.577 | 8.71 | 0.0172 | 1.67 | -- | -- | -- | -0.511 | 20.3 | -- | -- | -- | -- |
| 175.33 | 0.617 | 8.71 | -0.365 | -- | -1.86 | -- | -- | -0.729 | -- | 28.2 | 627 | -- | -- |
| 121.16 | 0.513 | 8.73 | -- | 1.14 | -1.11 | -- | -- | -0.633 | 21.2 | 28.2 | 578 | -- | -- |
| 305.71 | 0.817 | 8.67 | 0.00567 | -- | -- | -- | -- | -0.53 | -- | -- | -- | -- | -- |
| 151.98 | 0.577 | 8.71 | -- | 1.67 | -- | -- | -- | -0.513 | 20.3 | -- | -- | -- | -- |
| 178.94 | 0.623 | 8.71 | -- | -- | -1.8 | -- | -- | -0.693 | -- | 28.14 | 627 | -- | -- |
| 305.71 | 0.816 | 8.67 | -- | -- | -- | -- | -- | -0.53 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.22 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 7 |
| 30 | 113.35 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 8 |
| 31 | 113.43 | temperature | 25.0 | 270 | > th | dose independent | rect. | 14 | 6 |
| 49 | 114.54 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 60 | 115.54 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 72 | 115.77 | temperature | 25.0 | 90 | > th | dose independent | rect. | 15 | 8 |
| 101 | 116.82 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 106 | 116.88 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 111 | 117.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 16 |
| 137 | 117.81 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 147 | 117.97 | temperature | 25.0 | 10 | > th | dose independent | rect. | 15 | 8 |
| 151 | 118.04 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 14 | 17 |
| 154 | 118.06 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 158 | 118.12 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 17 |
| 159 | 118.12 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 17 |
| 174 | 118.30 | radiation | 1.0 | 270 | > th | dose independent | sin | 15 | NA |
| 176 | 118.30 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 178 | 118.35 | radiation | 1.0 | 270 | < th | dose independent | sin | 15 | NA |
| 191 | 118.51 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 201 | 118.69 | temperature | 10.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 202 | 118.69 | temperature | 30.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 203 | 118.69 | humidity | 50.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 206 | 118.69 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 207 | 118.69 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 212 | 118.69 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 214 | 118.69 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 216 | 118.69 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 7 |
| 227 | 118.82 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 229 | 118.83 | wind | 9.0 | 10 | < th | dose independent | rect. | 20 | 7 |
| 247 | 118.86 | radiation | 1.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 255 | 118.91 | temperature | 25.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 277 | 119.24 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 279 | 119.28 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 288 | 119.44 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 301 | 119.49 | humidity | 70.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 302 | 119.49 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 307 | 119.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 8 |
| 308 | 119.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 312 | 119.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 322 | 119.78 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 20 | 7 |
| 324 | 119.78 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 20 | 7 |
| 343 | 119.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 18 |
| 344 | 119.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 345 | 119.95 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 17 |
| 352 | 120.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 354 | 120.02 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 355 | 120.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 357 | 120.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 8 |
| 358 | 120.02 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 359 | 120.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 360 | 120.03 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 361 | 120.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 394 | 120.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 7 |
| 395 | 120.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 407 | 120.36 | radiation | 40.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 411 | 120.38 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 4 |
| 421 | 120.45 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 422 | 120.45 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 423 | 120.45 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 424 | 120.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 425 | 120.45 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 430 | 120.45 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 431 | 120.45 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 432 | 120.45 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 464 | 120.58 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 515 | 120.70 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 520 | 120.75 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 522 | 120.76 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 550 | 120.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 552 | 120.93 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 555 | 120.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 556 | 120.93 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 563 | 120.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 17 |
| 575 | 121.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 585 | 121.15 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 598 | 121.25 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 610 | 121.33 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 623 | 121.38 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 630 | 121.43 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 637 | 121.48 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 679 | 121.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 16 |
| 680 | 121.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 20 |
| 683 | 121.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 16 |
| 684 | 121.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 20 |
| 706 | 121.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 707 | 121.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 732 | 121.99 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 19 |
| 750 | 122.06 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 16 |
| 752 | 122.07 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 753 | 122.08 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 759 | 122.12 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 15 | 4 |
| 802 | 122.26 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 805 | 122.26 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 808 | 122.28 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 824 | 122.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 17 |
| 832 | 122.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 17 |
| 839 | 122.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 864 | 122.46 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 867 | 122.46 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 871 | 122.46 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 877 | 122.46 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 878 | 122.46 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 898 | 122.46 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 17 |
| 904 | 122.47 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 914 | 122.52 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 920 | 122.56 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 925 | 122.59 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 20 |
| 947 | 122.62 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 21 |