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Os05g0142100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.058) R2 : 0.751
β1 : 0.87 (0.254) R2dD : 0.0107 R2D : 0.0119
β2 : 4.58 (0.138) R2dC : 0.607 R2C : 0.554
β3 : -6.49 (0.393) R2dE : 0.323 R2E : 0.101
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -8.23 (1.33) R2dD*E : 0.067 R2D*E : -0.169
γ1 : -0.141 (0.122) R2dN8 : 0.00128 R2N8 : -0.00269
σ : 0.999
deviance : 459.96
__
_____
C
peak time of C : 16.6
E
wheather : radiation
threshold : 0.9616
memory length : 1420
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
453.3 1 11.3 0.865 4.6 -6.53 -1.6 -8.33 -0.146 16.6 0.9671 1421 -- --
491.73 1.03 11.4 -0.0307 4.51 -4.87 -1.83 -- -0.289 16.8 1.103 1430 -- --
459.96 0.999 11.3 0.87 4.58 -6.49 -- -8.23 -0.141 16.6 0.9616 1420 -- --
499.01 1.04 11.4 -0.0461 4.48 -5.01 -- -- -0.29 17 1.066 1441 -- --
546.13 1.09 11.4 -0.243 -- -7.78 -- -0.807 -0.515 -- 1.634 2047 -- --
765.57 1.3 11.3 1.15 4.47 -- -2.12 -- 0.362 16.9 -- -- -- --
777.03 1.31 11.3 1.14 4.46 -- -- -- 0.351 16.9 -- -- -- --
533.48 1.08 11.3 0.167 -- -7.59 -- -- -0.343 -- 1.666 2050 -- --
499.05 1.04 11.4 -- 4.49 -4.98 -- -- -0.28 17 1.061 1441 -- --
1824.32 2 11.2 0.974 -- -- -- -- 0.236 -- -- -- -- --
811.16 1.33 11.3 -- 4.44 -- -- -- 0.224 16.9 -- -- -- --
534.34 1.08 11.4 -- -- -7.51 -- -- -0.353 -- 1.66 2055 -- --
1849.35 2.01 11.2 -- -- -- -- -- 0.128 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 448.61 radiation 1 1440 < th dose dependent sin 13 NA
3 454.29 radiation 1 1440 < th dose dependent rect. 7 23
4 454.38 radiation 1 1440 < th dose dependent rect. 15 22
10 454.98 radiation 1 1440 < th dose dependent rect. 14 19
26 456.63 radiation 1 1440 < th dose dependent rect. 15 15
28 456.69 radiation 1 1440 < th dose dependent rect. 10 23
31 456.84 radiation 1 1440 < th dose dependent rect. 22 21
38 456.97 radiation 1 1440 < th dose dependent rect. 3 23
39 456.99 radiation 1 1440 < th dose dependent rect. 3 21
41 457.00 radiation 1 1440 < th dose dependent rect. 3 16
43 457.00 radiation 1 1440 < th dose dependent rect. 1 23
46 457.02 radiation 1 1440 < th dose dependent rect. 1 18
48 457.03 radiation 1 1440 < th dose dependent no NA NA
69 457.16 radiation 1 1440 < th dose dependent rect. 18 1
89 457.45 radiation 1 1440 < th dose dependent rect. 18 6
100 458.23 radiation 1 1440 < th dose dependent rect. 18 10
103 458.43 radiation 1 1440 < th dose dependent rect. 18 8
114 460.15 wind 7 43200 < th dose dependent rect. 11 1
121 461.87 radiation 1 1440 < th dose dependent rect. 16 10
122 461.90 radiation 1 1440 < th dose dependent rect. 16 12
128 462.23 radiation 1 1440 < th dose dependent rect. 16 3
133 462.54 wind 1 43200 > th dose dependent rect. 11 2
137 462.66 radiation 1 1440 < th dose dependent rect. 18 23
145 463.49 radiation 1 14400 > th dose independent rect. 18 1
170 464.31 radiation 1 14400 < th dose dependent rect. 1 4
196 467.54 radiation 1 14400 < th dose independent rect. 18 6
197 467.64 radiation 1 14400 < th dose independent rect. 18 1
205 467.94 radiation 1 14400 < th dose independent rect. 18 10
232 470.82 radiation 1 1440 < th dose dependent sin 23 NA
237 471.52 radiation 1 14400 < th dose dependent rect. 18 6
240 471.67 radiation 1 14400 < th dose dependent rect. 18 10
244 471.71 radiation 1 14400 < th dose dependent rect. 18 1
256 472.85 wind 3 43200 > th dose dependent rect. 9 7
258 473.01 radiation 1 14400 < th dose dependent rect. 21 8
259 473.24 humidity 90 43200 > th dose independent rect. 22 1
264 473.67 humidity 90 43200 > th dose independent rect. 20 3
265 473.93 wind 3 43200 > th dose independent rect. 9 4
266 473.93 wind 5 43200 < th dose independent rect. 9 7
275 474.32 wind 3 43200 > th dose dependent rect. 10 5
282 474.58 wind 5 43200 > th dose independent rect. 9 7
294 475.67 wind 3 43200 < th dose independent rect. 8 5
296 476.09 humidity 90 43200 < th dose independent rect. 20 1
301 476.36 wind 9 43200 < th dose dependent rect. 9 5
311 477.09 temperature 25 1440 > th dose dependent rect. 16 1
317 477.65 wind 3 43200 > th dose dependent rect. 5 12
324 477.89 wind 5 43200 < th dose dependent rect. 9 4
385 479.56 wind 3 43200 > th dose independent rect. 9 1
395 479.77 wind 5 43200 < th dose independent rect. 5 12
411 480.41 wind 5 43200 < th dose dependent rect. 20 2
413 480.62 wind 3 43200 > th dose independent rect. 11 1
417 480.86 atmosphere 1005 43200 > th dose independent rect. 16 1
432 481.11 humidity 80 43200 < th dose independent rect. 4 3
445 481.88 wind 5 43200 > th dose dependent rect. 15 1
448 482.03 wind 3 43200 < th dose independent rect. 9 1
451 482.17 wind 5 43200 > th dose independent rect. 5 12
457 482.38 wind 9 43200 < th dose dependent rect. 8 7
466 482.72 humidity 80 43200 < th dose independent rect. 4 1
471 482.97 wind 3 43200 < th dose independent rect. 11 1
474 483.07 wind 5 43200 > th dose independent rect. 9 13
498 483.83 wind 3 43200 > th dose dependent sin 0 NA
499 483.84 wind 5 43200 < th dose independent rect. 9 13
504 484.13 atmosphere 1005 43200 < th dose independent rect. 18 1
509 484.30 atmosphere 1005 43200 > th dose independent rect. 18 1
524 484.78 wind 1 43200 > th dose dependent rect. 20 1
526 484.80 wind 5 43200 < th dose independent sin 0 NA
538 484.98 temperature 25 1440 > th dose dependent rect. 11 9
544 485.09 wind 5 43200 > th dose independent sin 23 NA
546 485.11 humidity 80 43200 < th dose independent rect. 2 6
558 485.30 atmosphere 1005 43200 < th dose independent rect. 16 1
562 485.42 humidity 80 43200 > th dose independent rect. 3 2
573 485.56 wind 5 43200 > th dose dependent sin 22 NA
613 486.58 humidity 90 43200 > th dose dependent rect. 21 2
638 486.98 wind 5 43200 < th dose independent rect. 5 16
658 487.38 wind 5 43200 > th dose independent rect. 5 16
664 487.53 atmosphere 1005 43200 < th dose independent rect. 16 3
701 487.93 temperature 25 4320 > th dose independent rect. 10 1
724 488.31 humidity 90 43200 > th dose dependent rect. 19 5
750 488.59 temperature 25 1440 > th dose dependent sin 20 NA
753 488.64 wind 7 43200 < th dose independent rect. 24 17
761 488.72 wind 3 43200 > th dose dependent rect. 5 17
768 488.79 wind 7 43200 > th dose independent rect. 24 17
799 489.10 atmosphere 1005 43200 > th dose independent rect. 11 8
801 489.12 humidity 80 43200 < th dose dependent rect. 22 11
892 489.99 atmosphere 1005 43200 < th dose independent rect. 13 6
915 490.16 atmosphere 1005 43200 < th dose independent rect. 11 8
958 490.45 wind 9 43200 < th dose dependent rect. 3 13
973 490.67 radiation 40 43200 > th dose dependent rect. 10 1