FiT-DB / Search/ Help/ Sample detail

Os05g0135800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Pto kinase interactor 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.015) R2 : 0.0332
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.125 (0.0317) R2dN8 : 0.0429 R2N8 : 0.0332
σ : 0.283
deviance : 36.82
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.24 0.171 12.9 -0.744 0.467 0.218 0.326 -1.31 -0.038 1.17 19.3 1670 -- --
15.03 0.181 12.8 -0.615 0.453 0.457 0.474 -- -0.0107 1.33 18.7 3127 -- --
13.64 0.172 12.9 -0.75 0.468 0.231 -- -1.34 -0.0381 1.25 19.16 1675 -- --
15.26 0.182 12.8 -0.678 0.488 0.55 -- -- -0.0223 1.22 18.44 3165 -- --
26.86 0.241 12.9 -0.783 -- 0.28 -- -1.03 -0.0525 -- 19.17 2640 -- --
18.82 0.203 12.8 -0.409 0.461 -- 0.362 -- 0.0731 1.19 -- -- -- --
19.36 0.206 12.8 -0.422 0.462 -- -- -- 0.0709 1.3 -- -- -- --
27.4 0.244 12.8 -0.894 -- 0.613 -- -- -0.0563 -- 15.45 24121 -- --
23.2 0.226 12.8 -- 0.474 0.227 -- -- 0.106 1.23 18.44 3165 -- --
32.5 0.266 12.8 -0.404 -- -- -- -- 0.0805 -- -- -- -- --
24.06 0.229 12.8 -- 0.454 -- -- -- 0.118 1.26 -- -- -- --
34.65 0.274 12.8 -- -- -0.216 -- -- 0.201 -- 22.08 47520 -- --
36.82 0.283 12.8 -- -- -- -- -- 0.125 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.74 temperature 20 270 > th dose independent sin 12 NA
6 13.14 temperature 20 270 > th dose independent rect. 17 15
15 13.32 temperature 20 90 < th dose independent sin 11 NA
20 13.38 temperature 20 90 < th dose independent rect. 16 19
41 13.52 radiation 10 14400 < th dose dependent rect. 23 6
48 13.55 temperature 20 270 < th dose independent rect. 13 20
60 13.59 temperature 15 270 > th dose dependent sin 12 NA
65 13.62 temperature 20 720 > th dose independent rect. 15 10
72 13.64 temperature 20 1440 < th dose independent rect. 22 17
83 13.65 temperature 20 1440 > th dose independent rect. 21 18
91 13.66 temperature 20 4320 < th dose independent rect. 20 2
100 13.66 temperature 10 43200 < th dose dependent rect. 3 2
102 13.66 radiation 10 14400 < th dose dependent rect. 19 10
103 13.67 temperature 20 4320 > th dose independent rect. 20 2
114 13.68 temperature 20 720 > th dose independent sin 15 NA
117 13.68 humidity 90 14400 < th dose independent rect. 23 16
126 13.69 temperature 10 43200 < th dose independent rect. 4 1
136 13.69 humidity 90 14400 > th dose independent rect. 23 18
146 13.70 temperature 10 43200 > th dose independent rect. 3 2
159 13.71 temperature 20 720 > th dose independent rect. 14 13
173 13.72 temperature 20 1440 < th dose independent sin 6 NA
179 13.72 temperature 20 90 < th dose independent rect. 21 14
259 13.74 temperature 20 1440 < th dose independent rect. 12 21
279 13.75 temperature 20 1440 > th dose independent sin 6 NA
282 13.75 temperature 20 1440 > th dose independent rect. 6 2
297 13.75 temperature 20 1440 < th dose independent rect. 15 18
304 13.75 temperature 20 1440 > th dose independent rect. 12 21
323 13.76 temperature 20 1440 > th dose independent rect. 15 18
330 13.76 temperature 20 270 > th dose independent rect. 17 22
341 13.77 temperature 20 1440 < th dose independent rect. 5 3
433 13.78 humidity 90 14400 > th dose dependent rect. 5 2
437 13.79 temperature 20 1440 < th dose independent sin 12 NA
493 13.81 temperature 20 1440 > th dose independent sin 13 NA
539 13.81 temperature 20 1440 > th dose independent rect. 5 23
544 13.81 temperature 20 1440 < th dose independent rect. 5 23
545 13.81 temperature 10 43200 < th dose dependent sin 2 NA
570 13.82 temperature 20 1440 < th dose independent rect. 18 9
580 13.82 temperature 10 43200 > th dose independent rect. 2 17
600 13.83 humidity 90 14400 < th dose independent sin 6 NA
609 13.83 temperature 20 1440 < th dose independent rect. 16 12
632 13.83 temperature 20 270 > th dose independent rect. 13 22
636 13.83 temperature 25 10 < th dose dependent sin 11 NA
646 13.84 temperature 20 1440 < th dose independent rect. 20 6
675 13.84 humidity 90 14400 > th dose independent rect. 13 15
677 13.84 temperature 20 1440 < th dose independent rect. 12 16
708 13.85 temperature 20 1440 > th dose independent no NA NA
709 13.85 temperature 20 1440 < th dose independent no NA NA
737 13.85 temperature 20 1440 > th dose independent rect. 12 16
768 13.86 temperature 20 1440 > th dose independent rect. 20 6
798 13.86 humidity 90 14400 > th dose independent rect. 12 19
814 13.87 humidity 90 14400 > th dose independent sin 5 NA
846 13.87 humidity 90 14400 < th dose independent rect. 12 19
859 13.87 temperature 15 10 > th dose dependent sin 10 NA
914 13.88 temperature 20 90 > th dose independent rect. 19 23
946 13.89 humidity 90 14400 < th dose independent rect. 12 16
980 13.89 temperature 25 10 < th dose dependent rect. 16 18
986 13.90 temperature 10 43200 < th dose independent sin 4 NA