Os05g0134800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Haem peroxidase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0134800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Haem peroxidase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.44 | 0.427 | 2.93 | 0.292 | 0.117 | 1.55 | -0.458 | 3.94 | -0.0059 | 6.34 | 6.447 | 82 | -- | -- |
| 86.57 | 0.433 | 2.9 | 0.281 | 0.216 | 0.442 | -0.593 | -- | -0.0163 | 5.3 | 2.809 | 125 | -- | -- |
| 82.88 | 0.424 | 2.93 | 0.284 | 0.123 | 1.4 | -- | 3.65 | -0.0102 | 6.48 | 6.139 | 81 | -- | -- |
| 87.2 | 0.435 | 2.9 | 0.27 | 0.22 | 0.401 | -- | -- | -0.0211 | 5.91 | 0.04251 | 128 | -- | -- |
| 83.59 | 0.426 | 2.93 | 0.277 | -- | 1.35 | -- | 3.63 | -0.00805 | -- | 6.216 | 81 | -- | -- |
| 89.08 | 0.442 | 2.91 | 0.178 | 0.0636 | -- | -0.397 | -- | -0.0148 | 6.28 | -- | -- | -- | -- |
| 89.31 | 0.443 | 2.9 | 0.175 | 0.0789 | -- | -- | -- | -0.0127 | 8.91 | -- | -- | -- | -- |
| 88.13 | 0.437 | 2.9 | 0.238 | -- | 0.423 | -- | -- | 0.00612 | -- | 5.92 | 78 | -- | -- |
| 88.94 | 0.439 | 2.91 | -- | 0.182 | 0.315 | -- | -- | -0.0416 | 6.1 | -0.000774 | 134 | -- | -- |
| 89.66 | 0.442 | 2.91 | 0.175 | -- | -- | -- | -- | -0.0121 | -- | -- | -- | -- | -- |
| 90.11 | 0.444 | 2.91 | -- | 0.0792 | -- | -- | -- | -0.0321 | 8.74 | -- | -- | -- | -- |
| 89.53 | 0.441 | 2.91 | -- | -- | 0.317 | -- | -- | -0.0229 | -- | 5.963 | 76 | -- | -- |
| 90.47 | 0.444 | 2.91 | -- | -- | -- | -- | -- | -0.0315 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.62 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 79.25 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 14 | 3 |
| 3 | 79.49 | wind | 5.0 | 720 | > th | dose independent | rect. | 4 | 1 |
| 4 | 79.49 | wind | 5.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 8 | 79.68 | wind | 9.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 15 | 79.91 | wind | 5.0 | 720 | > th | dose dependent | rect. | 2 | 5 |
| 16 | 79.98 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 27 | 80.07 | wind | 7.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 34 | 80.11 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 35 | 80.11 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 46 | 80.19 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 47 | 80.19 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 54 | 80.34 | wind | 5.0 | 720 | > th | dose independent | rect. | 2 | 6 |
| 55 | 80.34 | wind | 3.0 | 720 | > th | dose dependent | rect. | 22 | 14 |
| 59 | 80.47 | wind | 5.0 | 90 | > th | dose dependent | rect. | 17 | 19 |
| 61 | 80.50 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 12 | 5 |
| 70 | 80.60 | wind | 7.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 71 | 80.62 | wind | 3.0 | 720 | > th | dose dependent | rect. | 10 | 1 |
| 73 | 80.64 | wind | 5.0 | 720 | > th | dose independent | rect. | 10 | 1 |
| 74 | 80.64 | wind | 7.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 75 | 80.65 | wind | 7.0 | 90 | > th | dose independent | rect. | 17 | 19 |
| 85 | 80.74 | wind | 5.0 | 720 | > th | dose independent | rect. | 22 | 14 |
| 94 | 80.78 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 109 | 80.88 | wind | 7.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 112 | 80.91 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 126 | 80.91 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 160 | 81.03 | wind | 3.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 232 | 81.44 | wind | 5.0 | 90 | > th | dose dependent | rect. | 19 | 17 |
| 339 | 81.68 | wind | 5.0 | 720 | < th | dose independent | rect. | 20 | 15 |
| 350 | 81.69 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 384 | 81.78 | wind | 5.0 | 720 | > th | dose independent | sin | 7 | NA |
| 409 | 81.80 | wind | 7.0 | 90 | > th | dose dependent | sin | 6 | NA |
| 431 | 81.85 | wind | 7.0 | 90 | < th | dose independent | sin | 6 | NA |
| 448 | 81.91 | wind | 9.0 | 90 | > th | dose independent | sin | 7 | NA |
| 456 | 81.93 | wind | 3.0 | 720 | > th | dose dependent | rect. | 4 | 8 |
| 470 | 81.97 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 480 | 81.98 | wind | 5.0 | 720 | < th | dose independent | sin | 8 | NA |
| 511 | 82.03 | wind | 5.0 | 720 | < th | dose independent | rect. | 20 | 17 |
| 582 | 82.19 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 613 | 82.25 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 619 | 82.27 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 628 | 82.28 | wind | 5.0 | 720 | < th | dose independent | rect. | 3 | 8 |
| 675 | 82.38 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 693 | 82.39 | wind | 5.0 | 720 | > th | dose independent | rect. | 4 | 8 |
| 722 | 82.44 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 12 | 3 |
| 743 | 82.47 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 861 | 82.58 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 874 | 82.58 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 905 | 82.61 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 910 | 82.62 | wind | 5.0 | 720 | < th | dose independent | rect. | 1 | 8 |
| 962 | 82.71 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 963 | 82.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 966 | 82.71 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 970 | 82.71 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 979 | 82.71 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 980 | 82.71 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |