Os05g0134300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF408 family protein.
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Os05g0134300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF408 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.21 | 0.271 | 9.03 | 1.53 | 0.477 | -0.604 | -0.473 | 1.64 | 0.479 | 16.3 | 14.4 | 1273 | -- | -- |
| 36.16 | 0.28 | 9.08 | 1.19 | 0.483 | -0.493 | -0.618 | -- | 0.381 | 16.3 | 14.2 | 2626 | -- | -- |
| 33.71 | 0.27 | 9.03 | 1.53 | 0.469 | -0.612 | -- | 1.75 | 0.475 | 16.4 | 14.29 | 1174 | -- | -- |
| 36.43 | 0.281 | 9.08 | 1.15 | 0.464 | -0.586 | -- | -- | 0.379 | 16.3 | 13.41 | 1175 | -- | -- |
| 45.33 | 0.314 | 9.02 | 1.53 | -- | -0.729 | -- | 1.69 | 0.488 | -- | 11.85 | 1180 | -- | -- |
| 41.06 | 0.3 | 9.1 | 0.998 | 0.522 | -- | -0.59 | -- | 0.281 | 16 | -- | -- | -- | -- |
| 42.05 | 0.304 | 9.1 | 0.991 | 0.518 | -- | -- | -- | 0.278 | 16 | -- | -- | -- | -- |
| 47.85 | 0.322 | 9.07 | 1.19 | -- | -0.724 | -- | -- | 0.392 | -- | 11.8 | 1182 | -- | -- |
| 55.55 | 0.347 | 9.16 | -- | 0.52 | 0.566 | -- | -- | -0.00179 | 15.9 | -74.04 | 47520 | -- | -- |
| 56.69 | 0.352 | 9.1 | 0.969 | -- | -- | -- | -- | 0.264 | -- | -- | -- | -- | -- |
| 67.91 | 0.385 | 9.12 | -- | 0.498 | -- | -- | -- | 0.167 | 16 | -- | -- | -- | -- |
| 70.32 | 0.391 | 9.16 | -- | -- | 0.537 | -- | -- | -0.00454 | -- | -62.25 | 47520 | -- | -- |
| 81.48 | 0.421 | 9.12 | -- | -- | -- | -- | -- | 0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.89 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 10 |
| 3 | 31.26 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 55 | 31.84 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 62 | 31.90 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 67 | 31.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 92 | 32.06 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 127 | 32.19 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 141 | 32.26 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 163 | 32.33 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 209 | 32.48 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 21 |
| 231 | 32.54 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 232 | 32.55 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 19 | NA |
| 272 | 32.64 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 296 | 32.70 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 6 |
| 339 | 32.77 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 371 | 32.82 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 385 | 32.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 18 |
| 395 | 32.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 18 |
| 408 | 32.89 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 444 | 32.95 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 454 | 32.96 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 455 | 32.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 459 | 32.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 473 | 32.98 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 494 | 33.00 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 22 |
| 497 | 33.00 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 502 | 33.00 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 17 |
| 509 | 33.01 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 512 | 33.02 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 17 |
| 530 | 33.04 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 6 |
| 535 | 33.04 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 548 | 33.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 552 | 33.05 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 561 | 33.06 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 591 | 33.09 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 18 |
| 596 | 33.10 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 18 |
| 618 | 33.12 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 620 | 33.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 625 | 33.13 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 627 | 33.13 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 22 |
| 662 | 33.16 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 664 | 33.16 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 665 | 33.16 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 668 | 33.16 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 670 | 33.16 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 675 | 33.16 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 676 | 33.16 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 679 | 33.16 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 709 | 33.19 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 9 |
| 711 | 33.19 | radiation | 1.0 | 270 | < th | dose independent | rect. | 9 | 16 |
| 732 | 33.20 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 9 | 16 |
| 746 | 33.22 | wind | 7.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 747 | 33.22 | radiation | 30.0 | 90 | < th | dose independent | rect. | 2 | 7 |
| 751 | 33.22 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 765 | 33.23 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 17 |
| 779 | 33.24 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 15 |
| 846 | 33.28 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 847 | 33.28 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 848 | 33.28 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 872 | 33.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 6 |
| 874 | 33.29 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 875 | 33.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 899 | 33.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 913 | 33.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 916 | 33.32 | temperature | 15.0 | 30 | > th | dose independent | rect. | 12 | 21 |
| 949 | 33.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 960 | 33.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 965 | 33.34 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 996 | 33.36 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 19 |