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Os05g0134000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Shaggy-related protein kinase eta (EC 2.7.1.-) (ASK-eta) (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0211) R2 : 0.785
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.14 (0.0552) R2dC : 0.713 R2C : 0.701
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.52 (0.0443) R2dN8 : 0.084 R2N8 : 0.0722
σ : 0.397
deviance : 72.04
__
_____
C
peak time of C : 6.09
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
58.51 0.359 11.1 0.767 2.14 -0.613 0.393 0.181 0.521 6.05 49.95 4307 -- --
58.53 0.356 11.1 0.748 2.14 -0.553 0.397 -- 0.524 6.05 49 4300 -- --
58.89 0.357 11.1 0.77 2.14 -0.61 -- 0.184 0.521 6.04 50 4318 -- --
58.91 0.357 11.1 0.755 2.14 -0.55 -- -- 0.523 6.05 49.13 4313 -- --
147.98 0.567 11 0.558 -- -1.6 -- -0.592 0.696 -- 74 475 -- --
64.38 0.376 11.1 0.524 2.13 -- 0.366 -- 0.58 6.11 -- -- -- --
64.71 0.377 11.1 0.528 2.13 -- -- -- 0.579 6.11 -- -- -- --
145.02 0.561 11.1 0.679 -- -1.72 -- -- 0.717 -- 74.49 487 -- --
64.44 0.374 11.1 -- 2.14 -0.577 -- -- 0.486 6.08 53.71 16803 -- --
300.38 0.81 11.1 0.588 -- -- -- -- 0.626 -- -- -- -- --
72.04 0.397 11.1 -- 2.14 -- -- -- 0.52 6.09 -- -- -- --
157.1 0.584 11.1 -- -- -1.7 -- -- 0.641 -- 74.11 484 -- --
309.51 0.821 11.1 -- -- -- -- -- 0.561 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 55.76 atmosphere 1010.0 10 < th dose independent rect. 18 11
3 56.20 temperature 15.0 270 > th dose independent rect. 17 11
4 56.21 temperature 10.0 270 > th dose dependent rect. 17 10
5 56.21 temperature 10.0 10 > th dose dependent rect. 18 11
6 56.25 temperature 15.0 10 > th dose independent rect. 18 11
7 56.27 temperature 10.0 10 > th dose dependent rect. 10 19
8 56.36 temperature 20.0 270 > th dose independent rect. 5 1
9 56.41 atmosphere 1010.0 270 < th dose independent rect. 17 10
20 56.73 temperature 15.0 10 > th dose independent rect. 10 19
36 57.33 temperature 25.0 10 < th dose dependent rect. 13 12
76 57.70 precipitation 0.1 14400 > th dose independent rect. 4 16
77 57.70 precipitation 0.1 14400 < th dose independent rect. 4 16
78 57.70 wind 3.0 43200 < th dose dependent rect. 1 1
79 57.70 precipitation 0.1 14400 < th dose dependent rect. 4 16
80 57.73 wind 3.0 14400 < th dose independent rect. 4 2
81 57.74 wind 1.0 10 > th dose independent rect. 18 11
82 57.74 wind 1.0 10 > th dose independent rect. 10 19
83 57.74 temperature 15.0 270 > th dose independent rect. 7 21
86 57.75 precipitation 0.1 14400 > th dose dependent rect. 4 16
87 57.76 wind 3.0 14400 > th dose independent rect. 4 2
89 57.77 humidity 60.0 14400 > th dose independent rect. 16 18
90 57.77 wind 9.0 43200 > th dose dependent rect. 13 1
94 57.78 wind 9.0 43200 > th dose dependent rect. 11 3
104 57.82 atmosphere 1015.0 10 < th dose dependent rect. 18 11
106 57.82 atmosphere 995.0 10 > th dose dependent rect. 14 20
107 57.83 wind 9.0 43200 > th dose independent rect. 15 1
110 57.86 temperature 25.0 270 < th dose independent rect. 13 18
113 57.88 humidity 60.0 14400 < th dose independent rect. 16 18
114 57.88 wind 1.0 43200 < th dose dependent rect. 12 1
115 57.88 humidity 90.0 14400 < th dose dependent rect. 3 1
122 57.90 temperature 20.0 270 > th dose independent rect. 4 3
138 57.93 atmosphere 1010.0 10 < th dose independent rect. 10 19
140 57.93 atmosphere 995.0 90 > th dose dependent rect. 14 19
146 57.94 precipitation 0.1 14400 > th dose dependent rect. 17 3
150 57.95 wind 9.0 43200 > th dose dependent rect. 12 6
154 57.97 atmosphere 995.0 10 > th dose dependent rect. 23 11
159 57.99 wind 9.0 43200 > th dose dependent rect. 15 1
178 58.06 wind 9.0 43200 > th dose independent rect. 13 1
179 58.06 wind 1.0 43200 > th dose independent rect. 5 8
185 58.07 temperature 15.0 1440 > th dose independent rect. 11 13
189 58.08 wind 3.0 14400 < th dose independent rect. 24 6
197 58.09 wind 3.0 14400 < th dose dependent rect. 3 5
203 58.10 precipitation 0.1 14400 > th dose dependent rect. 19 2
207 58.11 radiation 30.0 43200 > th dose independent rect. 11 1
220 58.15 precipitation 0.1 14400 > th dose independent rect. 17 3
222 58.15 wind 1.0 43200 < th dose independent rect. 5 8
228 58.16 precipitation 0.1 14400 < th dose independent rect. 17 3
229 58.16 temperature 20.0 30 > th dose independent rect. 10 16
230 58.16 precipitation 0.1 14400 < th dose dependent rect. 17 3
245 58.18 precipitation 0.1 14400 > th dose dependent sin 1 NA
261 58.20 wind 3.0 14400 < th dose dependent rect. 7 1
262 58.20 wind 3.0 14400 < th dose dependent rect. 3 7
263 58.20 wind 3.0 14400 < th dose dependent rect. 24 8
264 58.20 temperature 15.0 10 > th dose dependent rect. 10 16
266 58.21 atmosphere 1000.0 10 > th dose independent rect. 23 11
271 58.21 wind 1.0 43200 < th dose dependent rect. 5 8
272 58.22 precipitation 0.1 14400 > th dose independent sin 0 NA
273 58.22 precipitation 0.1 14400 < th dose independent sin 0 NA
277 58.22 precipitation 0.1 14400 < th dose dependent sin 0 NA
288 58.23 precipitation 0.1 14400 > th dose dependent rect. 15 20
296 58.24 wind 3.0 14400 < th dose dependent rect. 24 13
298 58.25 wind 1.0 14400 < th dose independent rect. 8 2
300 58.25 wind 3.0 14400 > th dose independent rect. 24 6
304 58.25 temperature 20.0 10 > th dose independent rect. 10 14
320 58.26 wind 3.0 14400 < th dose dependent rect. 24 10
325 58.27 temperature 15.0 720 > th dose independent rect. 15 6
333 58.28 humidity 80.0 14400 > th dose independent rect. 5 2
343 58.29 wind 9.0 43200 < th dose independent rect. 13 1
356 58.30 humidity 80.0 14400 > th dose independent rect. 3 4
365 58.31 temperature 20.0 10 > th dose independent rect. 5 5
367 58.31 temperature 15.0 10 > th dose dependent rect. 5 5
373 58.32 atmosphere 1000.0 10 > th dose independent rect. 5 5
379 58.32 wind 3.0 14400 < th dose dependent rect. 3 10
396 58.33 wind 3.0 14400 < th dose dependent rect. 22 10
424 58.36 humidity 80.0 14400 > th dose independent rect. 3 1
425 58.36 humidity 80.0 14400 < th dose independent rect. 3 1
426 58.36 wind 1.0 14400 > th dose independent rect. 8 2
455 58.38 wind 9.0 43200 < th dose independent rect. 15 1
457 58.38 radiation 20.0 43200 > th dose independent rect. 15 1
459 58.38 radiation 1.0 10 < th dose independent rect. 18 11
460 58.38 wind 1.0 43200 > th dose independent rect. 21 16
479 58.39 temperature 15.0 270 > th dose dependent rect. 5 1
490 58.40 humidity 60.0 14400 < th dose independent sin 11 NA
509 58.40 atmosphere 995.0 720 > th dose dependent rect. 21 3
510 58.40 wind 1.0 43200 < th dose dependent rect. 8 5
520 58.41 humidity 80.0 14400 < th dose independent rect. 5 2
527 58.41 radiation 10.0 10 < th dose dependent rect. 18 11
532 58.42 humidity 80.0 14400 < th dose independent rect. 3 4
554 58.43 wind 3.0 14400 < th dose dependent sin 7 NA
563 58.43 humidity 60.0 14400 < th dose dependent rect. 14 22
565 58.44 humidity 60.0 14400 > th dose independent rect. 16 2
580 58.45 wind 3.0 14400 < th dose independent rect. 20 12
601 58.46 precipitation 0.1 14400 > th dose dependent no NA NA
602 58.46 wind 3.0 14400 < th dose dependent rect. 5 1
603 58.46 humidity 60.0 14400 < th dose dependent rect. 14 1
609 58.47 humidity 60.0 14400 > th dose independent sin 11 NA
613 58.47 wind 9.0 10 < th dose independent rect. 18 11
622 58.47 precipitation 0.1 14400 > th dose dependent rect. 4 13
625 58.48 humidity 50.0 4320 < th dose independent sin 23 NA
629 58.48 humidity 50.0 4320 < th dose independent rect. 11 6
630 58.48 humidity 60.0 10 > th dose independent rect. 18 11
633 58.48 precipitation 0.1 14400 > th dose dependent rect. 15 2
647 58.49 precipitation 0.1 14400 < th dose independent rect. 15 2
661 58.49 atmosphere 995.0 10 > th dose independent rect. 18 11
667 58.49 temperature 10.0 10 > th dose independent rect. 5 13
670 58.49 atmosphere 1015.0 10 < th dose independent rect. 5 13
684 58.49 precipitation 0.1 14400 < th dose dependent rect. 15 2
695 58.50 precipitation 0.1 14400 > th dose independent rect. 15 2
726 58.50 wind 1.0 43200 < th dose independent rect. 21 16
759 58.50 precipitation 0.1 14400 > th dose dependent rect. 9 23
760 58.51 humidity 50.0 4320 < th dose independent no NA NA
918 58.51 precipitation 0.1 14400 > th dose dependent rect. 19 23
970 58.54 wind 1.0 43200 < th dose dependent rect. 19 18
974 58.54 precipitation 0.1 14400 > th dose dependent rect. 7 23
981 58.55 humidity 80.0 14400 > th dose independent rect. 23 8
993 58.55 humidity 60.0 1440 > th dose dependent rect. 9 1