Os05g0131000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os05g0131000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 307.25 | 0.824 | 2.92 | 0.235 | 0.134 | 0.317 | 3.91 | 3.68 | -0.246 | 12.4 | 9.99 | 106 | -- | -- |
| 322.68 | 0.837 | 2.93 | 0.21 | 0.291 | 0.476 | 0.365 | -- | -0.251 | 12.5 | 10.37 | 32 | -- | -- |
| 323.17 | 0.844 | 2.93 | 0.255 | 0.122 | 0.301 | -- | 0.695 | -0.272 | 12.8 | 9.99 | 106 | -- | -- |
| 323.02 | 0.837 | 2.93 | 0.264 | 0.274 | 0.474 | -- | -- | -0.231 | 12.7 | 10.36 | 32 | -- | -- |
| 323.19 | 0.837 | 2.93 | 0.255 | -- | 0.255 | -- | 0.727 | -0.24 | -- | 10.36 | 102 | -- | -- |
| 329.26 | 0.851 | 2.94 | 0.21 | 0.195 | -- | -0.219 | -- | -0.267 | 23.8 | -- | -- | -- | -- |
| 329.47 | 0.85 | 2.94 | 0.219 | 0.196 | -- | -- | -- | -0.266 | 23.8 | -- | -- | -- | -- |
| 324.61 | 0.839 | 2.93 | 0.274 | -- | 0.281 | -- | -- | -0.244 | -- | 10.66 | 53 | -- | -- |
| 324.88 | 0.839 | 2.93 | -- | 0.285 | 0.467 | -- | -- | -0.248 | 12.8 | 10.4 | 36 | -- | -- |
| 331.89 | 0.851 | 2.94 | 0.224 | -- | -- | -- | -- | -0.264 | -- | -- | -- | -- | -- |
| 330.73 | 0.851 | 2.95 | -- | 0.199 | -- | -- | -- | -0.291 | 23.9 | -- | -- | -- | -- |
| 326.18 | 0.841 | 2.93 | -- | -- | 0.274 | -- | -- | -0.278 | -- | 10.52 | 53 | -- | -- |
| 333.22 | 0.852 | 2.94 | -- | -- | -- | -- | -- | -0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 290.48 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 9 |
| 3 | 291.17 | temperature | 20.0 | 10 | < th | dose independent | rect. | 8 | 7 |
| 16 | 293.65 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 4 |
| 23 | 293.84 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 30 | 294.53 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 6 | 9 |
| 36 | 294.99 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 6 | 4 |
| 44 | 295.32 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 6 | 2 |
| 65 | 296.81 | temperature | 20.0 | 10 | < th | dose independent | rect. | 8 | 2 |
| 71 | 296.81 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 106 | 297.13 | wind | 5.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 108 | 297.13 | wind | 5.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 157 | 298.79 | temperature | 20.0 | 10 | > th | dose independent | sin | 23 | NA |
| 162 | 298.98 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 163 | 298.99 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 179 | 298.99 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 180 | 298.99 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 198 | 299.27 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 204 | 299.76 | temperature | 20.0 | 10 | < th | dose independent | sin | 23 | NA |
| 214 | 300.66 | wind | 7.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 237 | 303.10 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 17 | 8 |
| 240 | 303.18 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 8 |
| 241 | 303.18 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 287 | 304.40 | radiation | 10.0 | 90 | < th | dose independent | rect. | 14 | 22 |
| 299 | 304.65 | wind | 5.0 | 1440 | < th | dose independent | rect. | 19 | 10 |
| 306 | 304.77 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 309 | 304.88 | wind | 5.0 | 1440 | > th | dose independent | rect. | 19 | 10 |
| 316 | 305.00 | wind | 5.0 | 1440 | > th | dose independent | rect. | 19 | 8 |
| 326 | 305.17 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 347 | 305.64 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 349 | 305.69 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 359 | 305.87 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 20 | 1 |
| 360 | 305.87 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 361 | 305.94 | radiation | 10.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 374 | 306.22 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 378 | 306.31 | radiation | 10.0 | 90 | < th | dose independent | sin | 0 | NA |
| 395 | 306.52 | wind | 7.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 397 | 306.54 | wind | 7.0 | 720 | > th | dose dependent | rect. | 20 | 12 |
| 407 | 306.65 | wind | 7.0 | 720 | > th | dose independent | rect. | 20 | 2 |
| 411 | 306.68 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 13 |
| 426 | 306.87 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 454 | 307.12 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 500 | 307.58 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 525 | 307.83 | wind | 5.0 | 720 | > th | dose independent | rect. | 23 | 5 |
| 532 | 307.85 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 22 | 1 |
| 538 | 307.85 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 539 | 307.85 | wind | 7.0 | 720 | > th | dose dependent | rect. | 20 | 2 |
| 590 | 308.20 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 10 |
| 591 | 308.20 | wind | 3.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 597 | 308.23 | wind | 7.0 | 720 | > th | dose dependent | rect. | 24 | 8 |
| 603 | 308.26 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 8 | 17 |
| 606 | 308.26 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 8 | 17 |
| 617 | 308.28 | radiation | 10.0 | 10 | < th | dose independent | sin | 22 | NA |
| 630 | 308.38 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 651 | 308.50 | radiation | 10.0 | 90 | < th | dose independent | rect. | 10 | 22 |
| 706 | 308.67 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 8 |
| 708 | 308.67 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 731 | 308.79 | wind | 7.0 | 1440 | < th | dose independent | rect. | 24 | 4 |
| 746 | 308.85 | radiation | 10.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 758 | 308.95 | radiation | 10.0 | 90 | > th | dose independent | rect. | 8 | 9 |
| 761 | 308.95 | humidity | 50.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 764 | 308.96 | radiation | 10.0 | 90 | < th | dose independent | rect. | 1 | 23 |
| 776 | 309.01 | radiation | 10.0 | 90 | < th | dose independent | no | NA | NA |
| 816 | 309.15 | precipitation | 0.1 | 720 | > th | dose independent | sin | 15 | NA |
| 854 | 309.34 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 864 | 309.38 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 11 |
| 874 | 309.41 | precipitation | 0.1 | 720 | < th | dose independent | sin | 16 | NA |
| 879 | 309.41 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 16 | NA |
| 888 | 309.44 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 925 | 309.58 | radiation | 10.0 | 90 | < th | dose independent | rect. | 19 | 23 |
| 989 | 309.85 | radiation | 10.0 | 30 | < th | dose independent | rect. | 7 | 23 |
| 998 | 309.87 | wind | 5.0 | 1440 | < th | dose independent | rect. | 20 | 1 |