Os05g0130500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0130500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.03 | 0.477 | 3.34 | -0.715 | 0.271 | 0.897 | -0.0758 | -1.36 | -0.0503 | 19.6 | 24.51 | 406 | -- | -- |
| 103.58 | 0.474 | 3.32 | -0.528 | 0.288 | 0.782 | -0.248 | -- | -0.00864 | 19.7 | 24.33 | 386 | -- | -- |
| 103.03 | 0.473 | 3.34 | -0.715 | 0.272 | 0.891 | -- | -1.4 | -0.0497 | 19.4 | 24.5 | 417 | -- | -- |
| 103.73 | 0.474 | 3.32 | -0.515 | 0.307 | 0.755 | -- | -- | -0.00105 | 19.5 | 24.3 | 390 | -- | -- |
| 105.47 | 0.478 | 3.35 | -0.816 | -- | 1.09 | -- | -1.74 | -0.0876 | -- | 24.5 | 463 | -- | -- |
| 113.6 | 0.5 | 3.31 | -0.373 | 0.642 | -- | 0.135 | -- | 0.0814 | 18.5 | -- | -- | -- | -- |
| 113.65 | 0.499 | 3.31 | -0.375 | 0.642 | -- | -- | -- | 0.0818 | 18.5 | -- | -- | -- | -- |
| 106.92 | 0.482 | 3.32 | -0.563 | -- | 0.985 | -- | -- | -0.0241 | -- | 24.4 | 453 | -- | -- |
| 110.32 | 0.489 | 3.3 | -- | 0.36 | 0.627 | -- | -- | 0.0779 | 19.2 | 24.6 | 390 | -- | -- |
| 135.12 | 0.543 | 3.3 | -0.391 | -- | -- | -- | -- | 0.0685 | -- | -- | -- | -- | -- |
| 117.36 | 0.507 | 3.3 | -- | 0.647 | -- | -- | -- | 0.124 | 18.5 | -- | -- | -- | -- |
| 114.98 | 0.499 | 3.3 | -- | -- | 0.902 | -- | -- | 0.0516 | -- | 24.6 | 440 | -- | -- |
| 139.15 | 0.551 | 3.29 | -- | -- | -- | -- | -- | 0.112 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.02 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 9 |
| 2 | 97.59 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 5 | 98.97 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 1 |
| 8 | 99.67 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 9 |
| 12 | 100.01 | wind | 1 | 90 | < th | dose independent | rect. | 9 | 17 |
| 13 | 100.27 | wind | 1 | 90 | < th | dose independent | rect. | 7 | 19 |
| 18 | 100.47 | wind | 1 | 90 | < th | dose independent | rect. | 23 | 3 |
| 19 | 100.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 11 |
| 20 | 100.61 | temperature | 30 | 720 | < th | dose independent | rect. | 2 | 12 |
| 28 | 100.85 | wind | 1 | 90 | < th | dose independent | rect. | 21 | 5 |
| 32 | 100.88 | wind | 1 | 90 | < th | dose independent | rect. | 14 | 12 |
| 46 | 101.14 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 2 |
| 48 | 101.16 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 5 |
| 52 | 101.23 | temperature | 15 | 10 | > th | dose dependent | rect. | 14 | 13 |
| 53 | 101.24 | temperature | 20 | 90 | > th | dose dependent | rect. | 14 | 13 |
| 54 | 101.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 3 |
| 64 | 101.36 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 5 |
| 71 | 101.48 | wind | 1 | 90 | < th | dose dependent | rect. | 23 | 3 |
| 84 | 101.75 | wind | 1 | 90 | < th | dose dependent | rect. | 9 | 17 |
| 93 | 101.85 | temperature | 25 | 10 | < th | dose independent | rect. | 13 | 11 |
| 98 | 101.88 | wind | 1 | 90 | < th | dose dependent | rect. | 21 | 5 |
| 103 | 101.94 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 12 |
| 110 | 102.05 | temperature | 25 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 111 | 102.06 | temperature | 20 | 90 | > th | dose dependent | sin | 17 | NA |
| 113 | 102.06 | wind | 1 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 130 | 102.15 | temperature | 25 | 720 | > th | dose dependent | rect. | 6 | 10 |
| 157 | 102.24 | temperature | 20 | 10 | > th | dose dependent | sin | 16 | NA |
| 176 | 102.33 | wind | 1 | 90 | < th | dose dependent | rect. | 14 | 12 |
| 222 | 102.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 9 |
| 231 | 102.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 239 | 102.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 3 |
| 251 | 102.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 11 |
| 296 | 102.94 | temperature | 30 | 720 | < th | dose independent | rect. | 19 | 19 |
| 314 | 102.98 | temperature | 25 | 270 | > th | dose dependent | rect. | 12 | 22 |
| 361 | 103.14 | temperature | 25 | 720 | > th | dose dependent | sin | 1 | NA |
| 366 | 103.16 | humidity | 60 | 720 | > th | dose independent | rect. | 2 | 12 |
| 374 | 103.19 | temperature | 25 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 384 | 103.24 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 12 |
| 389 | 103.25 | temperature | 30 | 90 | < th | dose dependent | rect. | 12 | 21 |
| 405 | 103.29 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 14 |
| 442 | 103.41 | temperature | 30 | 90 | < th | dose dependent | sin | 17 | NA |
| 468 | 103.49 | temperature | 30 | 10 | < th | dose dependent | sin | 17 | NA |
| 491 | 103.51 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 22 |
| 515 | 103.57 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 3 | 22 |
| 519 | 103.58 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 2 | 23 |
| 526 | 103.59 | radiation | 1 | 30 | < th | dose dependent | rect. | 3 | 22 |
| 528 | 103.60 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 20 |
| 563 | 103.66 | temperature | 30 | 720 | < th | dose independent | rect. | 2 | 19 |
| 617 | 103.79 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 15 |
| 631 | 103.81 | temperature | 30 | 270 | < th | dose independent | rect. | 23 | 23 |
| 643 | 103.84 | wind | 3 | 10 | < th | dose independent | rect. | 1 | 2 |
| 650 | 103.85 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 652 | 103.85 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 658 | 103.86 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 662 | 103.86 | temperature | 25 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 675 | 103.88 | temperature | 25 | 270 | > th | dose independent | sin | 18 | NA |
| 683 | 103.89 | humidity | 60 | 720 | > th | dose independent | rect. | 9 | 5 |
| 761 | 104.03 | humidity | 60 | 90 | > th | dose independent | rect. | 3 | 21 |
| 796 | 104.09 | humidity | 60 | 10 | > th | dose independent | rect. | 3 | 22 |
| 815 | 104.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 17 |
| 816 | 104.14 | humidity | 60 | 90 | > th | dose independent | rect. | 2 | 23 |
| 819 | 104.15 | temperature | 25 | 270 | < th | dose independent | sin | 19 | NA |
| 835 | 104.18 | temperature | 30 | 90 | < th | dose independent | rect. | 2 | 23 |
| 918 | 104.32 | radiation | 1 | 30 | < th | dose independent | rect. | 3 | 22 |
| 934 | 104.35 | temperature | 30 | 720 | > th | dose independent | rect. | 13 | 2 |