Os05g0130200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0130200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.84 | 0.378 | 12.6 | -1.32 | 0.696 | 1.14 | -0.644 | -5.47 | -0.304 | 8.81 | 24.24 | 1857 | -- | -- |
| 71.26 | 0.393 | 12.5 | -0.269 | 0.623 | 0.917 | -0.238 | -- | -0.0597 | 9.04 | 15.1 | 7758 | -- | -- |
| 65.6 | 0.377 | 12.6 | -1.53 | 0.705 | 1.39 | -- | -7.53 | -0.218 | 8.76 | 26.29 | 1891 | -- | -- |
| 71.05 | 0.393 | 12.5 | -0.258 | 0.599 | 1.04 | -- | -- | -0.134 | 9.32 | 13.31 | 7800 | -- | -- |
| 87.65 | 0.436 | 12.6 | -1.45 | -- | 1.07 | -- | -5.84 | -0.19 | -- | 26.34 | 1421 | -- | -- |
| 87.51 | 0.439 | 12.4 | 0.284 | 0.562 | -- | -0.471 | -- | 0.165 | 9.23 | -- | -- | -- | -- |
| 88.3 | 0.44 | 12.4 | 0.267 | 0.564 | -- | -- | -- | 0.164 | 9.23 | -- | -- | -- | -- |
| 90.28 | 0.443 | 12.5 | -0.274 | -- | 1.01 | -- | -- | -0.133 | -- | 9.774 | 8706 | -- | -- |
| 72.27 | 0.396 | 12.5 | -- | 0.594 | 0.869 | -- | -- | -0.0653 | 9.41 | 13.5 | 7776 | -- | -- |
| 106.79 | 0.483 | 12.4 | 0.265 | -- | -- | -- | -- | 0.167 | -- | -- | -- | -- | -- |
| 90.18 | 0.444 | 12.4 | -- | 0.564 | -- | -- | -- | 0.134 | 9.19 | -- | -- | -- | -- |
| 91.46 | 0.445 | 12.5 | -- | -- | 0.85 | -- | -- | -0.0427 | -- | 11.39 | 7300 | -- | -- |
| 108.64 | 0.487 | 12.4 | -- | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.84 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 2 | 60.94 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 3 | 61.04 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 4 | 61.19 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 5 | 61.23 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 7 | 61.64 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 9 | 62.08 | wind | 5 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 10 | 62.08 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 11 | 62.09 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 12 | 62.19 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 24 | 62.74 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 30 | 62.90 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 43 | 63.22 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 44 | 63.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 51 | 63.30 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 62 | 63.44 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 68 | 63.52 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 13 |
| 69 | 63.53 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 74 | 63.56 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 84 | 63.64 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 86 | 63.65 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 92 | 63.67 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 10 |
| 93 | 63.67 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 7 |
| 102 | 63.73 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 103 | 63.73 | wind | 3 | 43200 | > th | dose dependent | sin | 19 | NA |
| 113 | 63.76 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 114 | 63.77 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 118 | 63.78 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 10 |
| 121 | 63.79 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 135 | 63.85 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 15 |
| 136 | 63.86 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 13 |
| 139 | 63.87 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 166 | 63.93 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 199 | 64.01 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 210 | 64.03 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 248 | 64.12 | wind | 5 | 43200 | < th | dose independent | sin | 18 | NA |
| 268 | 64.15 | wind | 5 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 278 | 64.18 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 288 | 64.20 | wind | 5 | 14400 | > th | dose dependent | rect. | 23 | 17 |
| 294 | 64.22 | wind | 5 | 43200 | > th | dose independent | sin | 18 | NA |
| 301 | 64.23 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 360 | 64.32 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 404 | 64.39 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 11 |
| 428 | 64.41 | wind | 7 | 14400 | > th | dose dependent | rect. | 19 | 20 |
| 429 | 64.42 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 443 | 64.44 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 11 |
| 450 | 64.45 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 452 | 64.45 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 523 | 64.53 | wind | 7 | 14400 | < th | dose independent | rect. | 20 | 20 |
| 542 | 64.55 | wind | 9 | 43200 | < th | dose dependent | sin | 22 | NA |
| 543 | 64.55 | temperature | 25 | 1440 | > th | dose dependent | sin | 15 | NA |
| 567 | 64.59 | wind | 7 | 14400 | > th | dose independent | rect. | 20 | 20 |
| 568 | 64.59 | wind | 5 | 14400 | > th | dose dependent | sin | 3 | NA |
| 581 | 64.61 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 780 | 64.84 | humidity | 80 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 781 | 64.84 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 831 | 64.87 | radiation | 20 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 867 | 64.91 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 888 | 64.92 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 3 |