Os05g0130100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase domain containing protein.
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Os05g0130100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.42 | 0.391 | 3.04 | 0.931 | 0.13 | -0.598 | -0.122 | 5.06 | 0.209 | 6.34 | 28.62 | 1741 | -- | -- |
| 70.64 | 0.391 | 3.14 | 0.0893 | 0.159 | -0.0738 | -0.153 | -- | 0.114 | 5.81 | 33.7 | 1018 | -- | -- |
| 69.45 | 0.388 | 3.04 | 0.928 | 0.129 | -0.6 | -- | 5.08 | 0.209 | 6.45 | 28.63 | 1744 | -- | -- |
| 70.69 | 0.392 | 3.14 | 0.0874 | 0.158 | -0.0712 | -- | -- | 0.113 | 6.19 | 33.67 | 1019 | -- | -- |
| 70.28 | 0.39 | 3.03 | 0.958 | -- | -0.614 | -- | 5.13 | 0.23 | -- | 28.35 | 1817 | -- | -- |
| 70.85 | 0.395 | 3.14 | 0.0747 | 0.157 | -- | -0.154 | -- | 0.124 | 6.26 | -- | -- | -- | -- |
| 70.91 | 0.394 | 3.14 | 0.0731 | 0.156 | -- | -- | -- | 0.125 | 6.44 | -- | -- | -- | -- |
| 71.98 | 0.395 | 3.14 | 0.0904 | -- | -0.0682 | -- | -- | 0.118 | -- | 33.65 | 995 | -- | -- |
| 70.89 | 0.392 | 3.14 | -- | 0.161 | -0.0634 | -- | -- | 0.105 | 6.2 | 33.7 | 1018 | -- | -- |
| 72.18 | 0.397 | 3.14 | 0.0771 | -- | -- | -- | -- | 0.128 | -- | -- | -- | -- | -- |
| 71.05 | 0.394 | 3.14 | -- | 0.157 | -- | -- | -- | 0.117 | 6.41 | -- | -- | -- | -- |
| 72.19 | 0.396 | 3.14 | -- | -- | -0.057 | -- | -- | 0.111 | -- | 33.7 | 995 | -- | -- |
| 72.33 | 0.397 | 3.14 | -- | -- | -- | -- | -- | 0.119 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.10 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 2 | 65.41 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 3 | 65.50 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 4 | 65.51 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 6 | 65.60 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 9 | 65.68 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 11 | 65.70 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 17 | 65.74 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 18 | 65.74 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 21 | 65.74 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 25 | 65.74 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 34 | 65.74 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 35 | 65.74 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 55 | 65.74 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 70 | 65.75 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 72 | 65.77 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 82 | 65.89 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 86 | 65.90 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 89 | 65.90 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 93 | 65.92 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 95 | 65.92 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 97 | 65.92 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 102 | 65.92 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 104 | 65.92 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 106 | 65.92 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 111 | 65.92 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 112 | 65.92 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 113 | 65.92 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 117 | 65.92 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 122 | 65.92 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 124 | 65.95 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 127 | 65.99 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 129 | 66.00 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 141 | 66.04 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 143 | 66.04 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 197 | 66.50 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 199 | 66.61 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 237 | 67.26 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 255 | 67.28 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 264 | 67.41 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 285 | 67.65 | humidity | 90.0 | 720 | < th | dose independent | rect. | 1 | 1 |
| 299 | 67.80 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 350 | 67.97 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 351 | 67.98 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 3 |
| 384 | 68.10 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 386 | 68.11 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 390 | 68.12 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 396 | 68.14 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 399 | 68.14 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 403 | 68.14 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 404 | 68.14 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 410 | 68.14 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 411 | 68.14 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 431 | 68.14 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 450 | 68.19 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 455 | 68.21 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 458 | 68.22 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 459 | 68.22 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 462 | 68.23 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 465 | 68.23 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 471 | 68.24 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 473 | 68.24 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 474 | 68.24 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 477 | 68.24 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 478 | 68.24 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 480 | 68.24 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 485 | 68.24 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 489 | 68.24 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 490 | 68.24 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 495 | 68.24 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 502 | 68.27 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 514 | 68.32 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 517 | 68.33 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 526 | 68.35 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 557 | 68.38 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 572 | 68.40 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 589 | 68.42 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 6 |
| 594 | 68.44 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 605 | 68.48 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 608 | 68.49 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 626 | 68.53 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 631 | 68.55 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 12 |
| 632 | 68.55 | wind | 9.0 | 30 | < th | dose dependent | rect. | 3 | 22 |
| 671 | 68.61 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 676 | 68.62 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 12 |
| 693 | 68.66 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 11 |
| 724 | 68.67 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 10 |
| 731 | 68.69 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 734 | 68.70 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 742 | 68.71 | wind | 1.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 745 | 68.72 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 10 |
| 766 | 68.76 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 14 |
| 768 | 68.76 | wind | 9.0 | 720 | < th | dose dependent | rect. | 2 | 1 |
| 772 | 68.76 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 23 | 10 |
| 775 | 68.77 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 778 | 68.77 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 782 | 68.77 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 791 | 68.77 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 792 | 68.77 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 801 | 68.77 | wind | 1.0 | 10 | < th | dose independent | rect. | 15 | 12 |
| 803 | 68.77 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 20 |
| 804 | 68.77 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 834 | 68.78 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 1 |
| 864 | 68.82 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 10 | 15 |
| 936 | 68.85 | wind | 3.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 938 | 68.85 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 21 |
| 953 | 68.87 | wind | 9.0 | 10 | < th | dose independent | rect. | 16 | 10 |
| 954 | 68.87 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 12 |
| 958 | 68.88 | wind | 3.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 967 | 68.88 | wind | 1.0 | 30 | < th | dose independent | rect. | 6 | 21 |