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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0129200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to CEL2=CELLULASE 2 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.75 (0.0393) R2 : 0.825
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -4.53 (0.0982) R2dE : 0.814 R2E : 0.818
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.307 (0.0827) R2dN8 : 0.0069 R2N8 : 0.0112
σ : 0.737
deviance : 250.7
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : -111.1
memory length : 625
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 8.47
open length of G : 20.6

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
230.78 0.714 4.65 -0.432 5.47 -2.42 -0.536 -0.198 -0.291 12.2 7.874 243 1.2 18.4
230.36 0.707 4.66 -0.446 5.52 -2.39 -0.736 -- -0.31 12.2 5.389 230 1.33 18.3
231.03 0.708 4.66 -0.531 5.43 -2.35 -- -0.885 -0.323 12.2 6.174 250 1.14 18.3
232.09 0.71 4.65 -0.441 5.53 -2.43 -- -- -0.293 12.2 6.493 224 1.42 18.3
366.91 0.892 4.86 -0.702 -- -4.13 -- -1.32 -0.869 -- -92.27 628 7.8 22.1
315.58 0.833 4.71 -0.759 4.13 -- -0.875 -- -0.524 11.8 -- -- -- --
318.9 0.836 4.72 -0.794 4.13 -- -- -- -0.527 11.8 -- -- -- --
262.21 0.754 4.72 -0.373 -- -4.75 -- -- -0.274 -- -109.9 626 8.18 21.6
236.85 0.717 4.63 -- 5.59 -2.56 -- -- -0.234 12.3 7.782 221 1.48 18.3
1394.02 1.74 4.81 -0.916 -- -- -- -- -0.58 -- -- -- -- --
335.53 0.857 4.7 -- 4.14 -- -- -- -0.439 11.8 -- -- -- --
250.7 0.737 4.75 -- -- -4.53 -- -- -0.307 -- -111.1 625 8.47 20.6
1416.14 1.76 4.79 -- -- -- -- -- -0.478 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 232.72 temperature 10.0 270 > th dose dependent rect. 1 18
18 240.17 wind 7.0 90 < th dose independent rect. 3 17
25 241.40 radiation 10.0 10 < th dose dependent rect. 3 17
40 244.14 wind 7.0 270 < th dose independent rect. 1 18
44 244.45 temperature 15.0 90 > th dose independent rect. 3 17
46 245.04 wind 7.0 30 < th dose independent rect. 20 7
48 245.22 precipitation 0.1 30 < th dose independent rect. 3 17
49 245.22 precipitation 0.1 30 < th dose dependent rect. 3 17
51 245.41 precipitation 0.1 30 < th dose independent rect. 20 7
52 245.41 precipitation 0.1 30 < th dose dependent rect. 20 7
62 245.80 radiation 1.0 30 < th dose dependent rect. 20 7
63 245.81 temperature 10.0 30 > th dose independent rect. 20 7
64 245.81 temperature 30.0 30 < th dose independent rect. 20 7
65 245.81 humidity 50.0 30 > th dose independent rect. 20 7
68 245.81 atmosphere 995.0 30 > th dose independent rect. 20 7
69 245.81 radiation 1.0 30 < th dose independent rect. 20 7
76 245.81 atmosphere 1015.0 30 < th dose independent rect. 3 17
81 245.86 wind 9.0 30 < th dose dependent rect. 20 7
127 246.42 radiation 10.0 10 < th dose independent rect. 3 17
130 246.47 temperature 15.0 270 > th dose independent rect. 1 18
142 247.29 radiation 30.0 30 < th dose dependent rect. 16 15
165 247.82 atmosphere 1015.0 270 < th dose independent rect. 1 18
185 248.55 humidity 50.0 30 > th dose dependent rect. 20 7
190 248.72 precipitation 0.1 270 < th dose independent rect. 1 18
191 248.72 precipitation 0.1 270 < th dose dependent rect. 1 18
199 248.98 temperature 15.0 270 > th dose independent rect. 14 15
200 248.98 temperature 10.0 270 > th dose dependent rect. 24 9
305 250.88 temperature 10.0 270 > th dose independent rect. 5 9
306 250.88 atmosphere 995.0 270 > th dose independent rect. 5 9
307 250.88 atmosphere 1015.0 270 < th dose independent rect. 5 9
310 250.91 precipitation 0.1 270 < th dose independent rect. 5 9
312 250.91 precipitation 0.1 270 < th dose dependent rect. 5 9
338 251.15 wind 9.0 270 < th dose independent rect. 14 15
356 251.70 temperature 15.0 30 > th dose independent rect. 17 14
361 251.78 wind 9.0 30 < th dose dependent rect. 3 17
363 251.85 temperature 30.0 30 < th dose independent rect. 7 20
387 252.30 radiation 40.0 270 < th dose independent rect. 14 15
399 252.52 radiation 10.0 10 < th dose independent rect. 17 14
402 252.58 atmosphere 995.0 270 > th dose independent rect. 1 18
403 252.60 wind 9.0 270 < th dose independent rect. 5 9
406 252.74 radiation 1.0 270 < th dose dependent rect. 5 20
428 252.88 radiation 1.0 30 > th dose independent rect. 7 10
433 253.03 radiation 1.0 270 < th dose dependent rect. 8 17
455 253.46 precipitation 0.1 30 < th dose independent rect. 7 10
457 253.46 precipitation 0.1 30 < th dose dependent rect. 7 10
477 253.67 temperature 10.0 30 > th dose independent rect. 7 10
479 253.67 atmosphere 1015.0 30 < th dose independent rect. 7 10
498 253.73 wind 1.0 270 > th dose independent rect. 19 6
502 253.78 radiation 20.0 10 < th dose dependent rect. 16 17
504 253.79 atmosphere 995.0 30 > th dose independent rect. 7 10
515 253.92 wind 9.0 30 < th dose independent rect. 17 14
536 254.33 atmosphere 995.0 30 > th dose independent rect. 3 17
538 254.37 humidity 50.0 10 > th dose independent rect. 17 14
542 254.43 atmosphere 1015.0 30 < th dose independent rect. 20 7
543 254.47 wind 9.0 270 < th dose dependent rect. 19 5
560 254.81 temperature 10.0 1440 > th dose independent rect. 21 7
563 254.81 temperature 30.0 1440 < th dose independent rect. 21 7
567 254.81 humidity 50.0 1440 > th dose independent rect. 21 7
573 254.81 atmosphere 995.0 1440 > th dose independent rect. 21 7
574 254.81 radiation 1.0 1440 < th dose independent rect. 21 7
594 254.81 temperature 10.0 1440 > th dose independent rect. 4 17
618 254.84 radiation 40.0 1440 < th dose dependent rect. 21 7
635 255.24 atmosphere 995.0 30 > th dose dependent rect. 20 7
683 255.79 temperature 30.0 30 < th dose dependent rect. 7 20
704 255.88 radiation 30.0 30 < th dose dependent rect. 14 17
719 256.19 humidity 50.0 10 > th dose independent rect. 3 17
724 256.26 temperature 10.0 270 > th dose dependent rect. 14 16
736 256.48 radiation 30.0 10 < th dose dependent rect. 3 8
739 256.50 wind 9.0 30 < th dose independent rect. 7 10
741 256.50 temperature 30.0 270 < th dose dependent rect. 6 18
799 256.88 wind 1.0 10 > th dose independent rect. 7 10
809 257.03 precipitation 0.1 30 < th dose independent rect. 17 14
811 257.03 precipitation 0.1 30 < th dose dependent rect. 17 14
815 257.10 precipitation 0.1 270 < th dose independent rect. 14 15
816 257.10 precipitation 0.1 270 < th dose dependent rect. 14 15
830 257.25 radiation 1.0 270 > th dose independent rect. 4 10
847 257.26 temperature 30.0 270 < th dose independent rect. 19 20
854 257.29 radiation 1.0 270 < th dose independent rect. 8 17
920 257.71 temperature 10.0 30 > th dose dependent rect. 17 14
949 257.85 temperature 20.0 270 > th dose independent rect. 14 5