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Os05g0127300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.72 (0.025) R2 : 0.487
β1 : 0.947 (0.0917) R2dD : 0.125 R2D : 0.0734
β2 : 0.973 (0.0595) R2dC : 0.302 R2C : 0.289
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.463 (0.0534) R2dN8 : 0.113 R2N8 : 0.0523
σ : 0.471
deviance : 101.05
__
_____
C
peak time of C : 0.59
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.31 0.444 9.63 1.58 1.02 -1.06 0.351 18.7 0.502 1.14 32.9 252 -- --
91.48 0.445 9.7 0.923 1.07 0.736 0.362 -- 0.523 1.43 28.98 368 -- --
89.74 0.441 9.64 1.54 1.02 -1.11 -- 19.3 0.494 1.12 33.1 243 -- --
91.56 0.446 9.71 0.875 1.04 0.76 -- -- 0.509 1.3 29.5 321 -- --
153.29 0.577 9.64 1.52 -- -1.36 -- 19.4 0.501 -- 33.7 243 -- --
100.67 0.47 9.72 0.958 0.974 -- 0.297 -- 0.464 0.557 -- -- -- --
101.05 0.471 9.72 0.947 0.973 -- -- -- 0.463 0.59 -- -- -- --
142.78 0.557 9.72 0.692 -- 0.773 -- -- 0.418 -- 24.06 3914 -- --
111.01 0.491 9.72 -- 1.07 0.911 -- -- 0.414 1.53 29.1 324 -- --
160.39 0.592 9.7 0.981 -- -- -- -- 0.48 -- -- -- -- --
124.68 0.522 9.75 -- 0.987 -- -- -- 0.357 0.637 -- -- -- --
153.56 0.577 9.76 -- -- 0.915 -- -- 0.253 -- 23.5 2479 -- --
185.79 0.636 9.73 -- -- -- -- -- 0.371 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 82.20 atmosphere 995.0 10 > th dose independent rect. 9 8
2 82.75 temperature 30.0 270 < th dose independent rect. 7 8
6 83.71 atmosphere 995.0 90 > th dose independent rect. 9 7
7 83.84 wind 7.0 270 < th dose independent rect. 18 9
9 84.03 temperature 30.0 270 < th dose independent rect. 8 17
10 84.10 temperature 30.0 270 < th dose independent rect. 7 19
13 84.26 temperature 30.0 270 < th dose independent rect. 19 20
14 84.30 temperature 30.0 90 < th dose independent rect. 9 7
20 84.55 temperature 30.0 270 < th dose independent rect. 20 17
24 84.66 wind 9.0 270 < th dose dependent rect. 18 8
32 84.92 atmosphere 995.0 10 > th dose independent rect. 20 21
36 85.15 wind 9.0 270 < th dose independent rect. 7 7
40 85.24 radiation 1.0 270 > th dose independent rect. 7 7
47 85.31 precipitation 0.1 270 < th dose independent rect. 7 7
48 85.31 precipitation 0.1 270 < th dose dependent rect. 7 7
49 85.34 temperature 10.0 270 > th dose independent rect. 7 7
51 85.34 atmosphere 1015.0 270 < th dose independent rect. 7 7
53 85.34 temperature 10.0 270 > th dose independent rect. 14 17
59 85.42 wind 7.0 270 < th dose independent rect. 17 22
62 85.49 wind 7.0 270 < th dose independent rect. 8 17
63 85.50 wind 9.0 270 < th dose dependent rect. 8 17
70 85.58 precipitation 0.1 270 < th dose independent rect. 14 17
71 85.58 precipitation 0.1 270 < th dose dependent rect. 14 17
75 85.71 radiation 1.0 270 < th dose dependent rect. 18 9
78 85.79 radiation 40.0 270 < th dose independent rect. 15 16
84 85.91 radiation 1.0 270 < th dose independent rect. 18 9
85 85.92 humidity 60.0 270 > th dose independent rect. 18 9
96 85.99 wind 1.0 270 > th dose independent rect. 13 7
98 86.05 temperature 10.0 270 > th dose dependent rect. 1 7
105 86.14 temperature 10.0 270 > th dose dependent rect. 3 16
107 86.16 wind 9.0 270 < th dose independent rect. 14 17
110 86.17 radiation 40.0 10 < th dose independent rect. 17 16
117 86.21 wind 9.0 270 < th dose dependent rect. 7 19
121 86.24 radiation 1.0 10 > th dose independent rect. 9 8
125 86.25 temperature 30.0 270 < th dose independent rect. 18 9
129 86.26 wind 7.0 270 < th dose independent rect. 19 18
134 86.29 atmosphere 995.0 90 > th dose independent rect. 9 18
141 86.34 wind 9.0 10 < th dose independent rect. 9 8
143 86.35 temperature 10.0 270 > th dose independent rect. 18 9
145 86.35 radiation 20.0 270 < th dose independent rect. 18 9
148 86.35 temperature 10.0 270 > th dose independent rect. 3 15
149 86.35 atmosphere 1015.0 270 < th dose independent rect. 3 15
164 86.47 wind 1.0 270 > th dose dependent rect. 13 7
168 86.52 temperature 10.0 10 > th dose independent rect. 9 8
170 86.52 atmosphere 1015.0 10 < th dose independent rect. 9 8
171 86.52 precipitation 0.1 10 < th dose independent rect. 9 8
173 86.52 temperature 10.0 10 > th dose independent rect. 17 16
174 86.52 precipitation 0.1 10 < th dose dependent rect. 9 8
177 86.55 atmosphere 1015.0 270 < th dose dependent rect. 15 2
194 86.67 atmosphere 995.0 90 > th dose independent rect. 9 16
198 86.69 atmosphere 995.0 270 > th dose independent rect. 18 9
200 86.69 atmosphere 1015.0 270 < th dose dependent rect. 13 6
201 86.70 precipitation 0.1 90 < th dose independent rect. 9 6
204 86.70 precipitation 0.1 90 < th dose dependent rect. 9 6
207 86.71 wind 1.0 270 > th dose dependent rect. 14 5
208 86.71 atmosphere 1015.0 90 < th dose dependent rect. 15 5
212 86.76 humidity 50.0 270 > th dose dependent rect. 18 8
214 86.77 humidity 90.0 10 < th dose independent rect. 9 8
216 86.77 precipitation 0.1 270 < th dose independent rect. 3 15
218 86.77 precipitation 0.1 270 < th dose dependent rect. 3 15
225 86.82 precipitation 0.1 10 < th dose independent rect. 17 16
226 86.82 wind 1.0 90 > th dose dependent rect. 15 8
227 86.82 precipitation 0.1 10 < th dose dependent rect. 17 16
229 86.83 radiation 1.0 90 > th dose independent rect. 9 6
244 86.89 wind 9.0 90 < th dose independent rect. 9 6
252 86.91 temperature 10.0 90 > th dose independent rect. 9 6
254 86.91 humidity 90.0 90 < th dose independent rect. 9 6
257 86.91 atmosphere 1015.0 90 < th dose independent rect. 9 6
260 86.91 temperature 15.0 270 > th dose independent rect. 20 17
266 86.92 radiation 1.0 4320 > th dose independent rect. 18 14
286 86.99 humidity 70.0 270 > th dose independent rect. 1 7
289 87.00 wind 1.0 10 > th dose independent rect. 9 8
295 87.02 temperature 20.0 270 > th dose independent rect. 13 7
310 87.05 wind 1.0 270 > th dose independent rect. 13 18
317 87.06 precipitation 0.1 270 < th dose independent rect. 18 9
320 87.06 precipitation 0.1 270 < th dose dependent rect. 18 9
332 87.11 wind 9.0 10 < th dose independent rect. 17 16
336 87.15 temperature 10.0 270 > th dose independent rect. 13 7
337 87.15 atmosphere 1015.0 270 < th dose independent rect. 13 7
339 87.15 atmosphere 995.0 270 > th dose independent rect. 20 17
341 87.15 radiation 40.0 90 < th dose dependent rect. 15 18
348 87.18 precipitation 0.1 270 < th dose independent rect. 1 7
351 87.18 atmosphere 995.0 10 > th dose independent rect. 17 16
352 87.18 precipitation 0.1 270 < th dose dependent rect. 1 7
356 87.20 radiation 30.0 10 < th dose independent rect. 14 19
358 87.20 atmosphere 1015.0 10 < th dose dependent rect. 15 5
386 87.23 radiation 1.0 4320 < th dose independent rect. 18 14
388 87.25 wind 1.0 270 > th dose independent rect. 7 7
395 87.27 radiation 30.0 270 < th dose independent rect. 1 7
411 87.33 radiation 1.0 4320 < th dose independent rect. 21 11
414 87.34 wind 9.0 270 < th dose independent rect. 3 15
421 87.36 radiation 1.0 4320 < th dose independent rect. 24 8
426 87.37 radiation 1.0 4320 > th dose independent rect. 4 4
458 87.39 atmosphere 995.0 270 > th dose independent rect. 18 21
461 87.40 humidity 50.0 270 > th dose independent rect. 7 7
474 87.43 temperature 15.0 270 > th dose independent rect. 8 17
475 87.43 temperature 10.0 270 > th dose dependent rect. 13 7
477 87.44 wind 9.0 270 < th dose independent rect. 1 7
479 87.44 temperature 10.0 270 > th dose independent rect. 1 7
481 87.44 temperature 30.0 270 < th dose independent rect. 1 7
482 87.44 humidity 50.0 270 > th dose independent rect. 1 7
484 87.44 atmosphere 995.0 270 > th dose independent rect. 1 7
485 87.44 atmosphere 1015.0 270 < th dose independent rect. 1 7
511 87.50 temperature 10.0 270 > th dose dependent rect. 14 17
513 87.51 wind 1.0 90 > th dose independent rect. 9 6
518 87.52 precipitation 0.1 270 < th dose independent rect. 13 7
519 87.52 precipitation 0.1 270 < th dose dependent rect. 13 7
540 87.55 wind 9.0 270 < th dose dependent rect. 7 7
547 87.56 precipitation 0.1 270 < th dose independent rect. 8 17
549 87.56 precipitation 0.1 270 < th dose dependent rect. 8 17
578 87.63 humidity 50.0 270 > th dose independent rect. 8 17
588 87.65 precipitation 0.1 270 < th dose independent rect. 20 17
589 87.65 precipitation 0.1 270 < th dose dependent rect. 20 17
596 87.67 radiation 30.0 10 < th dose independent rect. 13 7
604 87.69 temperature 10.0 1440 > th dose independent rect. 10 7
608 87.69 temperature 10.0 1440 > th dose independent rect. 17 17
617 87.72 atmosphere 1015.0 270 < th dose independent rect. 14 17
631 87.76 atmosphere 1015.0 10 < th dose independent rect. 17 16
646 87.79 humidity 50.0 270 > th dose dependent rect. 1 7
657 87.80 wind 7.0 10 < th dose independent rect. 20 21
662 87.82 wind 9.0 270 < th dose independent rect. 13 7
670 87.83 radiation 40.0 90 < th dose independent rect. 15 5
685 87.85 temperature 20.0 270 > th dose independent rect. 15 2
700 87.89 radiation 40.0 270 < th dose independent rect. 15 2
723 87.91 temperature 10.0 90 > th dose dependent rect. 15 5
741 87.96 temperature 10.0 10 > th dose dependent rect. 17 16
763 87.98 temperature 10.0 270 > th dose dependent rect. 15 2
781 87.99 radiation 40.0 270 < th dose dependent rect. 1 7
798 88.01 atmosphere 995.0 10 > th dose independent rect. 9 17
804 88.01 radiation 40.0 30 < th dose dependent rect. 13 7
879 88.11 atmosphere 995.0 270 > th dose independent rect. 15 16
884 88.12 radiation 1.0 4320 > th dose independent sin 8 NA
885 88.12 wind 1.0 270 > th dose independent rect. 15 2
893 88.13 temperature 10.0 270 > th dose independent rect. 15 2
895 88.13 atmosphere 1010.0 270 < th dose independent rect. 15 2
899 88.13 temperature 10.0 270 > th dose independent rect. 17 22
900 88.14 radiation 1.0 4320 < th dose independent sin 8 NA
941 88.17 temperature 25.0 4320 > th dose dependent rect. 7 2
949 88.18 radiation 10.0 1440 < th dose dependent rect. 21 8
1000 88.24 radiation 40.0 270 < th dose independent rect. 13 6