Os05g0126700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0126700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.72 | 0.389 | 7.15 | -2.26 | 0.582 | -0.623 | -0.981 | -1.15 | 0.4 | 9.78 | 69.5 | 1282 | -- | -- |
| 71.36 | 0.393 | 7.13 | -2.12 | 0.576 | -0.674 | -0.914 | -- | 0.434 | 9.68 | 69.23 | 1263 | -- | -- |
| 72.23 | 0.396 | 7.14 | -2.28 | 0.602 | -0.615 | -- | -0.99 | 0.403 | 9.69 | 69.4 | 1300 | -- | -- |
| 73.95 | 0.401 | 7.11 | -2.13 | 0.592 | -0.687 | -- | -- | 0.477 | 9.63 | 70.3 | 1268 | -- | -- |
| 82.6 | 0.423 | 7.15 | -2.19 | -- | -0.979 | -- | -0.313 | 0.411 | -- | 70 | 961 | -- | -- |
| 89.25 | 0.443 | 7.13 | -2.26 | 0.667 | -- | -0.713 | -- | 0.388 | 10.3 | -- | -- | -- | -- |
| 91.29 | 0.447 | 7.13 | -2.29 | 0.671 | -- | -- | -- | 0.386 | 10.3 | -- | -- | -- | -- |
| 82.47 | 0.423 | 7.13 | -2.11 | -- | -0.991 | -- | -- | 0.474 | -- | 70.3 | 984 | -- | -- |
| 190.79 | 0.643 | 7.06 | -- | 0.64 | -0.916 | -- | -- | 0.72 | 9.95 | 70.83 | 1295 | -- | -- |
| 118.68 | 0.509 | 7.15 | -2.3 | -- | -- | -- | -- | 0.385 | -- | -- | -- | -- | -- |
| 229.37 | 0.708 | 7.08 | -- | 0.684 | -- | -- | -- | 0.641 | 10.5 | -- | -- | -- | -- |
| 196.43 | 0.653 | 7.07 | -- | -- | -1.27 | -- | -- | 0.742 | -- | 70.35 | 1029 | -- | -- |
| 258.12 | 0.75 | 7.09 | -- | -- | -- | -- | -- | 0.64 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.91 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 2 | 67.05 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 3 | 67.52 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 6 | 67.66 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 24 | 68.26 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 25 | 68.26 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 27 | 68.32 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 30 | 68.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 33 | 68.58 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 36 | 68.65 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 22 | 21 |
| 48 | 68.73 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 54 | 68.75 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 59 | 68.76 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 7 | 12 |
| 61 | 68.77 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 77 | 68.82 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 78 | 68.82 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 0 | NA |
| 97 | 68.88 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 15 |
| 103 | 68.88 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 15 |
| 110 | 68.89 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 2 | 17 |
| 112 | 68.90 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 117 | 68.92 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 15 |
| 127 | 68.94 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 6 | 11 |
| 132 | 68.94 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 145 | 68.96 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 158 | 68.98 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 7 |
| 160 | 68.99 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 2 | NA |
| 161 | 68.99 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 2 | NA |
| 164 | 68.99 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 2 | NA |
| 176 | 69.00 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 182 | 69.02 | humidity | 80.0 | 1440 | < th | dose dependent | no | NA | NA |
| 186 | 69.02 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 7 | 21 |
| 188 | 69.02 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 202 | 69.03 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 236 | 69.06 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 9 |
| 246 | 69.07 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 249 | 69.07 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 252 | 69.07 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 285 | 69.10 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 14 |
| 323 | 69.14 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 380 | 69.26 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 409 | 69.30 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 435 | 69.36 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 446 | 69.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 465 | 69.41 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 478 | 69.43 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 479 | 69.43 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 20 |
| 482 | 69.43 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 9 | 9 |
| 495 | 69.46 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 503 | 69.46 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 525 | 69.50 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 9 | 9 |
| 546 | 69.53 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 9 |
| 547 | 69.53 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 18 |
| 562 | 69.55 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 10 |
| 563 | 69.55 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 11 | 5 |
| 574 | 69.56 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 15 |
| 593 | 69.59 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 594 | 69.59 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 616 | 69.62 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 10 |
| 633 | 69.63 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 14 | 8 |
| 635 | 69.63 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 637 | 69.63 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 22 |
| 645 | 69.64 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 680 | 69.65 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 18 |
| 716 | 69.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 9 |
| 718 | 69.69 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 737 | 69.71 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 748 | 69.72 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 13 |
| 758 | 69.73 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 14 |
| 766 | 69.74 | humidity | 60.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 771 | 69.74 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 773 | 69.74 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 790 | 69.75 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 13 | 21 |
| 819 | 69.77 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 14 | 20 |
| 825 | 69.78 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 21 |
| 826 | 69.78 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 22 |
| 833 | 69.79 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 9 |
| 835 | 69.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 9 |
| 838 | 69.79 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 842 | 69.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 9 |
| 844 | 69.80 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 12 |
| 849 | 69.80 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 16 |
| 895 | 69.83 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 950 | 69.85 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 12 |
| 965 | 69.85 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 19 |
| 968 | 69.85 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 969 | 69.85 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 975 | 69.85 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 19 |
| 988 | 69.86 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 11 | 7 |