Os05g0125300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor protein kinase-like protein.
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Os05g0125300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor protein kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 136.55 | 0.544 | 3.59 | -4.82 | 0.207 | 99.5 | 0.485 | -579 | -0.0124 | 7.5 | 1000 | 10 | 5 | 4 |
| 162.82 | 0.599 | 2.75 | 0.206 | 0.207 | 2.21 | 0.477 | -- | -0.0126 | 7.51 | 1000 | 10 | 5 | 4 |
| 137.19 | 0.55 | 3.59 | -4.81 | 0.206 | 99.5 | -- | -579 | -0.0129 | 7.47 | 999.9 | 11 | 5.01 | 3.97 |
| 163.44 | 0.599 | 2.75 | 0.216 | 0.206 | 2.25 | -- | -- | -0.0131 | 7.47 | 1000 | 13 | 5.13 | 4.15 |
| 139.42 | 0.553 | 3.6 | -4.8 | -- | 99.6 | -- | -579 | -0.00882 | -- | 999.9 | 11 | 5.01 | 3.97 |
| 181.58 | 0.632 | 2.75 | 0.247 | 0.282 | -- | 0.729 | -- | -0.033 | 7.28 | -- | -- | -- | -- |
| 183.01 | 0.634 | 2.75 | 0.263 | 0.284 | -- | -- | -- | -0.0344 | 7.28 | -- | -- | -- | -- |
| 163.55 | 0.596 | 2.75 | 0.209 | -- | 2.36 | -- | -- | -0.012 | -- | 1000 | 16 | 5.48 | 4.33 |
| 162.75 | 0.594 | 2.76 | -- | 0.203 | 2.25 | -- | -- | -0.0391 | 7.21 | 999.9 | 16 | 5.42 | 4.42 |
| 187.27 | 0.639 | 2.76 | 0.268 | -- | -- | -- | -- | -0.0296 | -- | -- | -- | -- | -- |
| 184.83 | 0.636 | 2.76 | -- | 0.286 | -- | -- | -- | -0.0637 | 7.22 | -- | -- | -- | -- |
| 164.61 | 0.598 | 2.76 | -- | -- | 2.38 | -- | -- | -0.0253 | -- | 1001 | 18 | 5.47 | 4.34 |
| 189.17 | 0.642 | 2.77 | -- | -- | -- | -- | -- | -0.0593 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.55 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 3 | 136.59 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 4 | 136.59 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 9 | 136.75 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 10 | 136.75 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 28 | 146.60 | wind | 1.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 52 | 154.98 | wind | 1.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 80 | 157.66 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 140 | 157.66 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 200 | 157.69 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 201 | 157.83 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 245 | 161.46 | wind | 1.0 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 265 | 163.03 | wind | 1.0 | 30 | < th | dose dependent | rect. | 5 | 6 |
| 267 | 163.38 | wind | 1.0 | 30 | < th | dose dependent | rect. | 5 | 9 |
| 305 | 166.48 | radiation | 30.0 | 10 | > th | dose independent | rect. | 7 | 2 |
| 377 | 167.15 | temperature | 25.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 385 | 167.66 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 425 | 169.21 | wind | 1.0 | 30 | < th | dose independent | rect. | 5 | 9 |
| 458 | 169.65 | wind | 7.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 460 | 169.65 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 463 | 169.65 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 467 | 169.65 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 472 | 169.65 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 473 | 169.65 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 474 | 169.65 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 479 | 169.65 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 498 | 169.84 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 5 | 2 |
| 500 | 169.84 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 511 | 170.11 | wind | 1.0 | 30 | < th | dose independent | rect. | 5 | 6 |
| 541 | 171.02 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 562 | 171.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 9 |
| 565 | 171.36 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 569 | 171.36 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 9 |
| 575 | 171.36 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 9 |
| 576 | 171.36 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 585 | 171.36 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 15 |
| 599 | 171.51 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 1 |
| 691 | 172.03 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 742 | 172.22 | wind | 9.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 743 | 172.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 746 | 172.22 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 748 | 172.22 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 749 | 172.22 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 750 | 172.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 824 | 172.56 | wind | 1.0 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 836 | 172.63 | wind | 1.0 | 720 | < th | dose independent | rect. | 21 | 1 |
| 859 | 172.75 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 21 | 9 |
| 864 | 172.78 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 902 | 173.10 | wind | 1.0 | 720 | < th | dose independent | rect. | 18 | 5 |
| 903 | 173.10 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 911 | 173.19 | wind | 9.0 | 1440 | < th | dose independent | rect. | 22 | 8 |
| 951 | 173.26 | wind | 9.0 | 1440 | < th | dose independent | rect. | 24 | 6 |
| 970 | 173.37 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 7 | 1 |