Os05g0125200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Legume lectin, beta domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0125200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Legume lectin, beta domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 208.2 | 0.678 | 5.53 | 0.741 | 1.01 | 1.5 | -1.57 | -1.35 | 0.244 | 15.1 | 24.63 | 1345 | -- | -- |
| 208.45 | 0.672 | 5.5 | 1.09 | 1.01 | 1.4 | -1.54 | -- | 0.275 | 15.2 | 23.61 | 1338 | -- | -- |
| 215.71 | 0.684 | 5.52 | 0.868 | 1.05 | 1.54 | -- | -0.838 | 0.272 | 14.8 | 24.43 | 1262 | -- | -- |
| 215.51 | 0.684 | 5.49 | 1.07 | 1.07 | 1.49 | -- | -- | 0.273 | 14.7 | 23.75 | 1230 | -- | -- |
| 253.78 | 0.742 | 5.52 | 0.842 | -- | 1.56 | -- | -0.679 | 0.226 | -- | 24.12 | 1756 | -- | -- |
| 279.45 | 0.784 | 5.44 | 1.57 | 0.828 | -- | -1.84 | -- | 0.531 | 15.4 | -- | -- | -- | -- |
| 290.01 | 0.797 | 5.44 | 1.54 | 0.816 | -- | -- | -- | 0.519 | 15.2 | -- | -- | -- | -- |
| 254.43 | 0.743 | 5.5 | 1.01 | -- | 1.5 | -- | -- | 0.246 | -- | 23.77 | 1763 | -- | -- |
| 242.64 | 0.725 | 5.54 | -- | 1.04 | 1.7 | -- | -- | 0.0918 | 14.9 | 23.35 | 1299 | -- | -- |
| 327.92 | 0.846 | 5.44 | 1.5 | -- | -- | -- | -- | 0.498 | -- | -- | -- | -- | -- |
| 352.44 | 0.878 | 5.48 | -- | 0.786 | -- | -- | -- | 0.348 | 15.2 | -- | -- | -- | -- |
| 277.17 | 0.775 | 5.57 | -- | -- | 1.86 | -- | -- | -0.065 | -- | 17.49 | 6170 | -- | -- |
| 387.62 | 0.919 | 5.48 | -- | -- | -- | -- | -- | 0.331 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 208.18 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 2 | 208.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 22 |
| 9 | 208.76 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 19 |
| 15 | 209.00 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 22 |
| 19 | 209.07 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 20 |
| 21 | 209.07 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 30 | 209.15 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 33 | 209.16 | temperature | 25 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 59 | 209.28 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 71 | 209.36 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 118 | 209.65 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 140 | 209.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 13 |
| 168 | 209.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 172 | 209.91 | temperature | 25 | 1440 | > th | dose dependent | sin | 10 | NA |
| 181 | 209.97 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 202 | 210.06 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 12 |
| 236 | 210.24 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 242 | 210.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 317 | 210.93 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 4 |
| 319 | 210.94 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 391 | 211.45 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 397 | 211.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 405 | 211.55 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 423 | 211.66 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 425 | 211.67 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 427 | 211.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 5 |
| 432 | 211.69 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 439 | 211.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 444 | 211.72 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 494 | 211.87 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 8 |
| 500 | 211.88 | temperature | 30 | 1440 | < th | dose independent | sin | 0 | NA |
| 533 | 211.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 538 | 212.01 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 539 | 212.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 558 | 212.07 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 568 | 212.07 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 576 | 212.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 579 | 212.09 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 687 | 212.23 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 746 | 212.37 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 766 | 212.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 823 | 212.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 4 |
| 845 | 212.63 | temperature | 30 | 1440 | > th | dose independent | sin | 23 | NA |
| 892 | 212.71 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 902 | 212.74 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 907 | 212.76 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |