Os05g0122900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BLE1 protein.
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Os05g0122900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BLE1 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.43 | 0.207 | 14.5 | -0.957 | 0.39 | -0.0392 | 0.475 | -2.98 | -0.0188 | 23.4 | 15.49 | 677 | -- | -- |
| 25.68 | 0.238 | 14.4 | -0.417 | 0.339 | -0.158 | 0.0205 | -- | 0.135 | 23.4 | 15.49 | 677 | -- | -- |
| 19.85 | 0.208 | 14.5 | -0.913 | 0.381 | -0.0404 | -- | -2.7 | -0.00226 | 23.3 | 16.7 | 478 | -- | -- |
| 24.99 | 0.234 | 14.4 | -0.406 | 0.314 | -0.246 | -- | -- | 0.144 | 22.8 | 23.64 | 101 | -- | -- |
| 28.25 | 0.249 | 14.4 | -0.623 | -- | -0.391 | -- | -1.77 | 0.105 | -- | 16.52 | 573 | -- | -- |
| 25.95 | 0.239 | 14.4 | -0.447 | 0.375 | -- | 0.0576 | -- | 0.112 | 23.7 | -- | -- | -- | -- |
| 25.96 | 0.239 | 14.4 | -0.449 | 0.375 | -- | -- | -- | 0.111 | 23.7 | -- | -- | -- | -- |
| 30.36 | 0.258 | 14.4 | -0.373 | -- | -0.417 | -- | -- | 0.168 | -- | 23.64 | 101 | -- | -- |
| 29.08 | 0.251 | 14.4 | -- | 0.379 | -0.342 | -- | -- | 0.202 | 22.1 | 23.13 | 291 | -- | -- |
| 34.8 | 0.276 | 14.4 | -0.439 | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
| 31.28 | 0.262 | 14.4 | -- | 0.37 | -- | -- | -- | 0.161 | 23.6 | -- | -- | -- | -- |
| 33.84 | 0.271 | 14.4 | -- | -- | -0.487 | -- | -- | 0.221 | -- | 22.74 | 5 | -- | -- |
| 39.87 | 0.295 | 14.4 | -- | -- | -- | -- | -- | 0.165 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 2 | 19.46 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 4 | 19.46 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 8 | 19.49 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 9 | 19.50 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 19 | 19.52 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 30 | 19.55 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 23 |
| 42 | 19.57 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 23 |
| 57 | 19.61 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 64 | 19.62 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 67 | 19.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 71 | 19.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 74 | 19.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 76 | 19.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 118 | 19.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 213 | 19.88 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 214 | 19.88 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 258 | 19.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 280 | 19.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 401 | 20.13 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 532 | 20.23 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 553 | 20.24 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 569 | 20.25 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 630 | 20.28 | temperature | 10 | 1440 | > th | dose dependent | sin | 15 | NA |
| 823 | 20.34 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 869 | 20.35 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |