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Os05g0122600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Prefoldin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.37 (0.0347) R2 : 0.664
β1 : 1.42 (0.127) R2dD : 0.102 R2D : 0.129
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.31 (0.0857) R2dE : 0.54 R2E : 0.556
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0838 (0.0747) R2dN8 : 0.00126 R2N8 : -0.00134
σ : 0.648
deviance : 193.3
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C
peak time of C : --
E
wheather : temperature
threshold : 10.91
memory length : 751
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.37
open length of G : 3.7

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
177.02 0.625 8.37 1.64 0.775 2.51 1.46 1.41 -0.0706 3.28 8.977 745 3.02 3.8
180.21 0.625 8.39 1.56 0.633 2.26 1.71 -- -0.115 4.81 10.74 750 3.05 3.58
182.93 0.63 8.38 1.61 0.812 2.61 -- 1.14 -0.06 2.3 7.872 737 3 3.81
181.67 0.628 8.37 1.56 0.716 2.43 -- -- -0.0283 3.01 6.622 752 3.05 3.42
194.22 0.649 8.38 1.67 -- 2.29 -- 1.25 -0.0365 -- 10.3 747 2.22 4.07
239.17 0.725 8.26 1.71 2.08 -- 0.855 -- 0.196 9.48 -- -- -- --
241.85 0.728 8.26 1.74 2.08 -- -- -- 0.197 9.51 -- -- -- --
193.3 0.648 8.37 1.42 -- 2.31 -- -- -0.0838 -- 10.91 751 2.37 3.7
239.48 0.721 8.43 -- 0.732 2.68 -- -- -0.287 2.26 8.954 764 2.85 3.47
495.67 1.04 8.32 1.73 -- -- -- -- 0.203 -- -- -- -- --
322.05 0.839 8.31 -- 2.07 -- -- -- 0.00308 9.45 -- -- -- --
248.16 0.734 8.43 -- -- 2.41 -- -- -0.296 -- 12.53 757 2.48 3.51
574.61 1.12 8.36 -- -- -- -- -- 0.0111 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 179.69 temperature 10 720 > th dose dependent rect. 3 4
2 183.67 temperature 20 720 > th dose dependent rect. 4 3
17 192.77 temperature 10 720 > th dose dependent rect. 3 12
32 196.47 radiation 1 30 > th dose independent rect. 12 19
48 198.24 temperature 30 720 < th dose dependent rect. 7 2
50 198.57 temperature 30 720 < th dose independent rect. 7 3
51 198.65 humidity 60 720 > th dose independent rect. 15 4
54 198.93 radiation 1 30 > th dose independent rect. 14 17
58 199.39 radiation 30 720 < th dose independent rect. 15 4
61 199.67 humidity 70 720 > th dose independent rect. 17 1
68 200.18 radiation 1 30 > th dose independent rect. 8 23
80 200.77 temperature 10 720 > th dose dependent rect. 19 20
83 200.93 wind 7 270 < th dose independent rect. 2 13
88 201.05 radiation 1 30 < th dose independent rect. 13 17
97 201.19 radiation 10 90 < th dose dependent rect. 13 15
109 201.43 radiation 1 30 < th dose dependent rect. 13 17
130 201.74 radiation 1 30 < th dose independent rect. 15 15
143 201.88 radiation 1 1440 < th dose independent rect. 8 8
144 201.88 radiation 40 720 < th dose dependent rect. 15 4
154 202.19 temperature 30 720 < th dose independent rect. 24 10
155 202.20 temperature 20 720 > th dose independent rect. 4 2
166 202.21 radiation 1 30 < th dose dependent no NA NA
174 202.21 radiation 1 30 < th dose dependent rect. 15 23
180 202.24 radiation 1 30 < th dose dependent rect. 17 23
189 202.42 radiation 1 1440 < th dose independent rect. 11 5
193 202.43 temperature 30 270 < th dose dependent rect. 6 12
194 202.45 temperature 10 720 > th dose dependent rect. 10 5
196 202.47 humidity 90 720 < th dose dependent rect. 12 1
203 202.54 temperature 30 720 < th dose independent rect. 15 4
215 202.79 radiation 1 30 > th dose independent no NA NA
216 202.79 radiation 1 30 > th dose independent rect. 5 14
271 202.80 radiation 1 30 < th dose independent no NA NA
287 202.80 radiation 1 30 < th dose independent rect. 15 23
290 202.83 radiation 1 30 < th dose independent rect. 17 23
291 202.84 radiation 1 1440 > th dose independent rect. 11 5
297 202.85 radiation 1 1440 > th dose independent rect. 8 8
336 203.09 radiation 30 270 < th dose independent rect. 14 12
339 203.17 radiation 1 1440 < th dose dependent rect. 8 8
341 203.22 radiation 20 720 < th dose independent rect. 16 9
347 203.37 temperature 30 720 < th dose dependent rect. 24 11
348 203.39 temperature 25 10 > th dose independent rect. 5 13
352 203.43 temperature 10 90 > th dose dependent rect. 4 20
355 203.46 radiation 1 90 < th dose independent rect. 5 23
376 203.58 temperature 10 270 > th dose dependent rect. 2 20
378 203.61 radiation 1 30 > th dose independent rect. 17 14
413 203.86 radiation 1 30 > th dose independent rect. 10 21
425 203.90 radiation 1 1440 < th dose dependent rect. 13 3
433 204.01 radiation 1 1440 < th dose dependent rect. 15 1
442 204.09 temperature 10 10 > th dose dependent rect. 4 20
451 204.22 temperature 30 720 < th dose dependent rect. 24 17
452 204.25 radiation 40 270 < th dose dependent rect. 14 13
459 204.32 temperature 20 720 > th dose dependent sin 6 NA
473 204.39 radiation 10 720 < th dose independent rect. 17 1
474 204.39 temperature 30 90 < th dose independent rect. 7 21
493 204.54 humidity 60 720 > th dose independent rect. 15 12
533 204.82 temperature 30 720 < th dose independent rect. 15 21
538 204.84 radiation 10 720 > th dose independent rect. 12 1
539 204.85 temperature 20 10 > th dose dependent rect. 5 17
543 204.88 radiation 1 30 < th dose independent sin 12 NA
549 204.93 radiation 1 30 > th dose independent rect. 5 2
570 204.98 radiation 1 720 > th dose independent rect. 18 12
572 205.01 radiation 10 720 < th dose independent rect. 19 11
574 205.02 temperature 30 90 < th dose independent rect. 17 11
624 205.38 radiation 1 1440 < th dose independent rect. 8 5
625 205.38 radiation 1 1440 < th dose dependent rect. 8 5
640 205.45 temperature 30 720 < th dose dependent sin 4 NA
663 205.61 humidity 70 90 > th dose independent rect. 17 11
668 205.61 temperature 10 720 > th dose dependent rect. 19 12
674 205.64 radiation 1 1440 < th dose dependent rect. 9 19
679 205.66 radiation 1 30 > th dose independent rect. 10 23
688 205.70 radiation 1 1440 < th dose dependent rect. 9 13
698 205.73 radiation 10 720 < th dose dependent rect. 17 1
701 205.75 temperature 10 720 > th dose dependent sin 5 NA
702 205.75 radiation 1 1440 < th dose dependent rect. 11 17
721 205.81 radiation 1 1440 < th dose dependent rect. 11 11
738 205.88 radiation 1 1440 < th dose dependent rect. 11 13
770 205.95 radiation 40 720 < th dose independent rect. 7 3
794 206.03 humidity 50 720 > th dose independent rect. 16 18
800 206.05 radiation 1 1440 < th dose independent rect. 11 1
801 206.05 radiation 1 1440 < th dose dependent rect. 11 1
814 206.10 humidity 70 90 > th dose independent rect. 15 13
848 206.25 temperature 30 270 < th dose independent rect. 15 11
868 206.31 radiation 1 1440 < th dose independent rect. 11 19
872 206.33 radiation 20 720 < th dose independent rect. 3 4
906 206.49 humidity 50 720 > th dose dependent rect. 15 4
917 206.54 radiation 1 1440 < th dose independent rect. 9 21
947 206.70 radiation 1 30 > th dose independent sin 13 NA
970 206.79 wind 9 720 < th dose independent rect. 19 20
995 206.89 radiation 1 30 > th dose independent rect. 12 21