Os05g0122500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PWWP domain containing protein.
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Os05g0122500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : PWWP domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 453.57 | 1 | 3.05 | 0.0719 | 0.148 | 4.82 | 0.448 | -4.23 | -0.0222 | 8.35 | 0.9964 | 10 | 5.98 | 8.04 |
| 456.22 | 0.995 | 3.05 | 0.0714 | 0.148 | 4.84 | 0.468 | -- | -0.0218 | 8.33 | 1.001 | 10 | 5.97 | 8.06 |
| 454.19 | 0.993 | 3.05 | 0.0828 | 0.147 | 4.8 | -- | -3.94 | -0.0219 | 8.42 | 0.9939 | 10 | 5.97 | 8.02 |
| 456.28 | 0.995 | 3.05 | 0.0665 | 0.147 | 4.44 | -- | -- | -0.0325 | 8.65 | 0.9645 | 10 | 5.96 | 8.79 |
| 455.39 | 0.994 | 3.05 | 0.0853 | -- | 4.89 | -- | -4.01 | -0.0203 | -- | 0.9706 | 10 | 5.98 | 8.08 |
| 490.53 | 1.04 | 3.06 | -0.0345 | 0.233 | -- | 0.286 | -- | -0.0836 | 8.4 | -- | -- | -- | -- |
| 490.79 | 1.04 | 3.06 | -0.0255 | 0.232 | -- | -- | -- | -0.0836 | 8.46 | -- | -- | -- | -- |
| 456.3 | 0.995 | 3.06 | 0.0644 | -- | 4.62 | -- | -- | -0.0343 | -- | 0.9809 | 8 | 5.98 | 9.15 |
| 455.2 | 0.994 | 3.05 | -- | 0.148 | 4.51 | -- | -- | -0.0388 | 8.78 | 0.9503 | 8 | 5.98 | 9.08 |
| 493.8 | 1.04 | 3.07 | -0.0244 | -- | -- | -- | -- | -0.0813 | -- | -- | -- | -- | -- |
| 490.81 | 1.04 | 3.06 | -- | 0.232 | -- | -- | -- | -0.0808 | 8.47 | -- | -- | -- | -- |
| 454.12 | 0.993 | 3.06 | -- | -- | 3.97 | -- | -- | -0.0366 | -- | 0.9 | 8 | 5.98 | 9.08 |
| 493.81 | 1.04 | 3.07 | -- | -- | -- | -- | -- | -0.0786 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 456.49 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 7 |
| 2 | 457.80 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 4 | 458.10 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 6 | 458.63 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 7 |
| 16 | 460.91 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 26 | 460.91 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 41 | 462.57 | wind | 3.0 | 720 | > th | dose independent | rect. | 2 | 1 |
| 44 | 462.82 | wind | 3.0 | 720 | > th | dose independent | rect. | 1 | 3 |
| 47 | 463.12 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 48 | 463.33 | wind | 3.0 | 720 | > th | dose dependent | rect. | 2 | 2 |
| 49 | 463.34 | humidity | 80.0 | 90 | > th | dose independent | rect. | 12 | 1 |
| 79 | 466.08 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 3 |
| 95 | 466.08 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 159 | 469.23 | wind | 3.0 | 720 | < th | dose independent | rect. | 1 | 4 |
| 184 | 469.96 | wind | 5.0 | 90 | > th | dose independent | rect. | 11 | 3 |
| 205 | 470.53 | humidity | 80.0 | 10 | > th | dose independent | rect. | 14 | 1 |
| 231 | 470.88 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 256 | 471.61 | wind | 5.0 | 270 | > th | dose dependent | rect. | 24 | 9 |
| 265 | 471.88 | wind | 9.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 269 | 471.92 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 276 | 472.15 | wind | 9.0 | 4320 | < th | dose independent | rect. | 13 | 2 |
| 277 | 472.16 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 293 | 472.36 | temperature | 25.0 | 10 | < th | dose independent | rect. | 12 | 2 |
| 314 | 472.63 | wind | 3.0 | 270 | < th | dose independent | rect. | 24 | 10 |
| 335 | 472.98 | wind | 5.0 | 90 | > th | dose independent | rect. | 24 | 14 |
| 404 | 473.62 | wind | 3.0 | 10 | > th | dose independent | rect. | 1 | 13 |
| 466 | 474.05 | wind | 3.0 | 10 | > th | dose independent | rect. | 5 | 9 |
| 471 | 474.09 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 10 |
| 488 | 474.26 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 1 | 5 |
| 520 | 474.56 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 9 |
| 569 | 474.88 | wind | 5.0 | 270 | > th | dose independent | sin | 8 | NA |
| 610 | 475.08 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 637 | 475.26 | wind | 3.0 | 4320 | < th | dose dependent | rect. | 17 | 12 |
| 648 | 475.31 | wind | 7.0 | 720 | < th | dose dependent | rect. | 22 | 7 |
| 665 | 475.37 | wind | 3.0 | 4320 | < th | dose independent | rect. | 16 | 13 |
| 669 | 475.39 | wind | 3.0 | 10 | < th | dose independent | rect. | 3 | 16 |
| 671 | 475.39 | wind | 3.0 | 270 | > th | dose dependent | rect. | 23 | 13 |
| 705 | 475.62 | wind | 5.0 | 270 | < th | dose independent | sin | 8 | NA |
| 712 | 475.66 | wind | 3.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 783 | 475.98 | wind | 3.0 | 4320 | > th | dose independent | rect. | 16 | 13 |
| 807 | 476.10 | wind | 5.0 | 270 | < th | dose dependent | rect. | 24 | 10 |
| 822 | 476.19 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 22 |
| 826 | 476.21 | wind | 3.0 | 10 | < th | dose independent | rect. | 3 | 13 |
| 860 | 476.32 | radiation | 20.0 | 270 | > th | dose independent | rect. | 9 | 2 |
| 864 | 476.32 | wind | 3.0 | 90 | > th | dose dependent | rect. | 11 | 3 |
| 871 | 476.37 | wind | 5.0 | 30 | < th | dose dependent | rect. | 3 | 9 |
| 875 | 476.39 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 12 | 2 |
| 903 | 476.46 | radiation | 40.0 | 30 | < th | dose independent | rect. | 6 | 23 |
| 909 | 476.48 | wind | 1.0 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 943 | 476.56 | wind | 3.0 | 10 | > th | dose independent | sin | 2 | NA |
| 960 | 476.62 | wind | 3.0 | 10 | < th | dose independent | rect. | 3 | 18 |
| 991 | 476.72 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 12 | 1 |
| 993 | 476.73 | radiation | 20.0 | 90 | < th | dose independent | rect. | 12 | 1 |
| 996 | 476.73 | wind | 3.0 | 10 | > th | dose independent | rect. | 1 | 16 |