Os05g0121100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os05g0121100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.7 | 0.608 | 2.97 | 0.0975 | 0.0549 | -0.795 | 0.606 | 1.51 | 0.0552 | 5.56 | 0.1894 | 5541 | -- | -- |
| 169.77 | 0.607 | 2.96 | 0.0215 | 0.0557 | -0.696 | 0.596 | -- | 0.0404 | 5.2 | 0.5 | 5540 | -- | -- |
| 168.6 | 0.605 | 2.97 | 0.0935 | 0.0588 | -0.805 | -- | 1.49 | 0.0541 | 6.03 | 0.5316 | 5540 | -- | -- |
| 170.58 | 0.608 | 2.96 | 0.00655 | 0.0525 | -0.718 | -- | -- | 0.0382 | 6.49 | 0.4748 | 5540 | -- | -- |
| 168.78 | 0.605 | 2.97 | 0.0955 | -- | -0.806 | -- | 1.48 | 0.0554 | -- | 0.5227 | 5540 | -- | -- |
| 176.75 | 0.623 | 2.97 | 0.111 | 0.0431 | -- | 0.693 | -- | -0.038 | 5.35 | -- | -- | -- | -- |
| 177.89 | 0.625 | 2.97 | 0.113 | 0.0557 | -- | -- | -- | -0.0409 | 7.32 | -- | -- | -- | -- |
| 170.73 | 0.609 | 2.96 | 0.00752 | -- | -0.718 | -- | -- | 0.0387 | -- | 0.4919 | 5540 | -- | -- |
| 170.58 | 0.608 | 2.96 | -- | 0.0524 | -0.72 | -- | -- | 0.0372 | 6.46 | 0.4766 | 5540 | -- | -- |
| 178.06 | 0.624 | 2.98 | 0.114 | -- | -- | -- | -- | -0.04 | -- | -- | -- | -- | -- |
| 178.23 | 0.625 | 2.98 | -- | 0.0568 | -- | -- | -- | -0.0535 | 7.19 | -- | -- | -- | -- |
| 170.73 | 0.609 | 2.96 | -- | -- | -0.72 | -- | -- | 0.0381 | -- | 0.4937 | 5540 | -- | -- |
| 178.4 | 0.623 | 2.98 | -- | -- | -- | -- | -- | -0.0526 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 163.36 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 7 | 163.73 | radiation | 20.0 | 30 | > th | dose independent | rect. | 7 | 2 |
| 39 | 164.48 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 19 | 3 |
| 44 | 164.48 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 19 | 3 |
| 117 | 164.76 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 122 | 165.19 | wind | 1.0 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 130 | 165.49 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 135 | 166.11 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 145 | 166.11 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 155 | 166.13 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 7 | 2 |
| 240 | 166.90 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 3 |
| 259 | 167.01 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 7 |
| 277 | 167.09 | radiation | 20.0 | 30 | < th | dose independent | sin | 11 | NA |
| 278 | 167.10 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 9 |
| 303 | 167.28 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 9 |
| 305 | 167.29 | radiation | 20.0 | 30 | > th | dose independent | sin | 11 | NA |
| 313 | 167.36 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 347 | 167.48 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 3 |
| 350 | 167.51 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 353 | 167.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 354 | 167.53 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 356 | 167.53 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 8 |
| 357 | 167.54 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 358 | 167.54 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 382 | 167.66 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 12 |
| 383 | 167.66 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 12 |
| 396 | 167.73 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 397 | 167.73 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 3 |
| 402 | 167.82 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 406 | 167.86 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 9 |
| 410 | 167.87 | wind | 1.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 416 | 167.92 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 9 |
| 417 | 167.92 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 9 |
| 419 | 167.98 | wind | 1.0 | 90 | < th | dose independent | rect. | 20 | 1 |
| 423 | 168.00 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 12 |
| 455 | 168.09 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 21 | 9 |
| 464 | 168.13 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 466 | 168.13 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 4 |
| 468 | 168.16 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 22 | 8 |
| 470 | 168.18 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 493 | 168.25 | wind | 9.0 | 30 | > th | dose dependent | rect. | 1 | 11 |
| 501 | 168.25 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 506 | 168.29 | wind | 9.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 515 | 168.31 | temperature | 25.0 | 10 | < th | dose independent | rect. | 22 | 8 |
| 536 | 168.37 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 537 | 168.37 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 553 | 168.40 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 20 |
| 579 | 168.54 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 580 | 168.54 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 4 |
| 590 | 168.60 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 5 |
| 611 | 168.70 | wind | 9.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 615 | 168.70 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 15 |
| 620 | 168.70 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 15 |
| 626 | 168.72 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 15 |
| 631 | 168.73 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 15 |
| 637 | 168.75 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 645 | 168.78 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 17 |
| 646 | 168.78 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 17 |
| 650 | 168.80 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 17 |
| 696 | 168.88 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 698 | 168.88 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 11 |
| 730 | 168.93 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 11 | 13 |
| 733 | 168.93 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 737 | 168.93 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 749 | 168.95 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 753 | 168.96 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 10 | 15 |
| 825 | 169.02 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 827 | 169.02 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 3 |
| 843 | 169.05 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 23 | NA |
| 851 | 169.06 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 23 | NA |
| 855 | 169.06 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 23 | NA |
| 864 | 169.07 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 938 | 169.18 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 978 | 169.22 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 20 |
| 989 | 169.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 20 |
| 992 | 169.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 20 |