Os05g0120200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter related domain containing protein.
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Os05g0120200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter related domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.02 | 0.358 | 11.2 | -0.58 | 0.328 | -1.38 | 0.169 | -1.37 | -0.029 | 9.53 | 0.6701 | 1446 | -- | -- |
| 58.98 | 0.358 | 11.2 | -0.646 | 0.316 | -1.04 | 0.172 | -- | -0.00438 | 9.22 | 0.9808 | 1452 | -- | -- |
| 58.1 | 0.355 | 11.2 | -0.571 | 0.326 | -1.39 | -- | -1.42 | -0.0282 | 9.35 | 0.6583 | 1450 | -- | -- |
| 58.81 | 0.357 | 11.2 | -0.684 | 0.3 | -1.07 | -- | -- | -0.0419 | 9.34 | 1.425 | 1452 | -- | -- |
| 60.56 | 0.362 | 11.2 | -0.593 | -- | -1.52 | -- | -1.34 | -0.0405 | -- | 0.67 | 1507 | -- | -- |
| 71.22 | 0.396 | 11.2 | -0.446 | 0.348 | -- | 0.101 | -- | 0.0889 | 9.48 | -- | -- | -- | -- |
| 71.26 | 0.395 | 11.2 | -0.442 | 0.348 | -- | -- | -- | 0.089 | 9.48 | -- | -- | -- | -- |
| 61.46 | 0.365 | 11.2 | -0.666 | -- | -1.22 | -- | -- | -0.06 | -- | 1.72 | 1521 | -- | -- |
| 68.89 | 0.387 | 11.2 | -- | 0.353 | -0.721 | -- | -- | 0.0379 | 9.58 | 2.529 | 1442 | -- | -- |
| 78.36 | 0.414 | 11.2 | -0.445 | -- | -- | -- | -- | 0.0901 | -- | -- | -- | -- | -- |
| 76.42 | 0.409 | 11.1 | -- | 0.348 | -- | -- | -- | 0.138 | 9.58 | -- | -- | -- | -- |
| 71.79 | 0.395 | 11.2 | -- | -- | -0.943 | -- | -- | 0.0316 | -- | 2.562 | 1543 | -- | -- |
| 83.58 | 0.427 | 11.2 | -- | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.10 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 5 | 55.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 6 | 55.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 20 |
| 54 | 55.48 | radiation | 1 | 1440 | < th | dose dependent | sin | 20 | NA |
| 104 | 56.46 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 107 | 56.47 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 20 |
| 113 | 56.48 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 16 |
| 180 | 56.80 | radiation | 1 | 1440 | < th | dose independent | sin | 20 | NA |
| 195 | 56.86 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 209 | 56.94 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 11 |
| 226 | 57.04 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 13 |
| 241 | 57.12 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 13 |
| 243 | 57.14 | humidity | 80 | 1440 | > th | dose independent | sin | 21 | NA |
| 245 | 57.14 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 289 | 57.20 | radiation | 1 | 1440 | > th | dose independent | sin | 20 | NA |
| 324 | 57.32 | humidity | 80 | 1440 | < th | dose independent | sin | 22 | NA |
| 389 | 57.62 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 395 | 57.62 | humidity | 70 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 399 | 57.65 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 423 | 57.73 | humidity | 90 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 437 | 57.77 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 454 | 57.83 | humidity | 90 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 545 | 58.11 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 573 | 58.14 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 16 |
| 651 | 58.24 | humidity | 80 | 720 | > th | dose independent | rect. | 15 | 6 |
| 657 | 58.24 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 673 | 58.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 708 | 58.31 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 750 | 58.38 | humidity | 90 | 720 | > th | dose dependent | sin | 19 | NA |
| 756 | 58.40 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 766 | 58.42 | humidity | 80 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 797 | 58.50 | humidity | 80 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 868 | 58.65 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 874 | 58.65 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 886 | 58.67 | humidity | 80 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 917 | 58.73 | humidity | 70 | 1440 | > th | dose dependent | sin | 20 | NA |
| 921 | 58.73 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 21 |
| 944 | 58.77 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 967 | 58.82 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 968 | 58.82 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 969 | 58.82 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 991 | 58.86 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 10 |