Os05g0120100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Splicing factor RSZ33.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0120100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Splicing factor RSZ33.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.55 | 0.295 | 11.9 | 0.0585 | 0.521 | 0.483 | 0.296 | -1.19 | -0.0844 | 17.4 | 19.8 | 2860 | -- | -- |
| 42.16 | 0.302 | 11.9 | 0.249 | 0.492 | 0.646 | 0.195 | -- | -0.0635 | 17.3 | 20.6 | 2777 | -- | -- |
| 39.72 | 0.294 | 11.9 | 0.0528 | 0.526 | 0.488 | -- | -1.2 | -0.0841 | 17.2 | 19.8 | 2785 | -- | -- |
| 41.97 | 0.302 | 11.9 | 0.263 | 0.518 | 0.699 | -- | -- | -0.0401 | 17.1 | 19.9 | 2771 | -- | -- |
| 54.1 | 0.343 | 11.9 | 0.0701 | -- | 0.484 | -- | -1.05 | -0.0942 | -- | 20.29 | 2958 | -- | -- |
| 50.75 | 0.334 | 11.8 | 0.618 | 0.497 | -- | 0.519 | -- | 0.126 | 17.6 | -- | -- | -- | -- |
| 51.29 | 0.335 | 11.8 | 0.617 | 0.501 | -- | -- | -- | 0.129 | 17.3 | -- | -- | -- | -- |
| 55.6 | 0.347 | 11.9 | 0.308 | -- | 0.704 | -- | -- | -0.0266 | -- | 19.9 | 1783 | -- | -- |
| 43.01 | 0.305 | 11.9 | -- | 0.535 | 0.835 | -- | -- | -0.0963 | 17.2 | 19.9 | 2860 | -- | -- |
| 64.4 | 0.375 | 11.8 | 0.6 | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
| 61.32 | 0.366 | 11.8 | -- | 0.491 | -- | -- | -- | 0.0599 | 17.3 | -- | -- | -- | -- |
| 56.19 | 0.349 | 11.9 | -- | -- | 0.759 | -- | -- | -0.0998 | -- | 18.9 | 14621 | -- | -- |
| 73.88 | 0.401 | 11.8 | -- | -- | -- | -- | -- | 0.0496 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.56 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 2 | 39.01 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 8 | 39.29 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 10 | 39.39 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 13 | 39.45 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 15 | 39.47 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 21 | 39.54 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 24 | 39.55 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 30 | 39.57 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 15 | 11 |
| 39 | 39.61 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 87 | 39.76 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 6 |
| 97 | 39.78 | temperature | 20.0 | 4320 | < th | dose independent | sin | 15 | NA |
| 117 | 39.82 | temperature | 20.0 | 4320 | > th | dose independent | sin | 15 | NA |
| 126 | 39.83 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 135 | 39.85 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 186 | 39.95 | humidity | 90.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 193 | 39.95 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 13 |
| 195 | 39.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 203 | 39.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 225 | 39.99 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 256 | 40.03 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 257 | 40.03 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 286 | 40.05 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 8 |
| 316 | 40.09 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 324 | 40.10 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 348 | 40.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 19 |
| 359 | 40.13 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 384 | 40.15 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 8 |
| 401 | 40.17 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 414 | 40.18 | humidity | 90.0 | 14400 | < th | dose independent | sin | 19 | NA |
| 423 | 40.18 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 18 | NA |
| 447 | 40.21 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 448 | 40.21 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 464 | 40.22 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 22 |
| 471 | 40.23 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 498 | 40.26 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 512 | 40.27 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 533 | 40.28 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 556 | 40.30 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 571 | 40.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 576 | 40.32 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 578 | 40.32 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 9 |
| 588 | 40.33 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 589 | 40.33 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 605 | 40.34 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 7 |
| 687 | 40.38 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 691 | 40.39 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 703 | 40.40 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 791 | 40.44 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 809 | 40.46 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 4 |
| 828 | 40.47 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 843 | 40.48 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 844 | 40.48 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 853 | 40.48 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 894 | 40.50 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 907 | 40.51 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 5 | 23 |
| 914 | 40.51 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 926 | 40.52 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 934 | 40.52 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 938 | 40.53 | temperature | 20.0 | 4320 | > th | dose independent | no | NA | NA |
| 949 | 40.53 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 18 |
| 954 | 40.53 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 961 | 40.54 | temperature | 20.0 | 4320 | < th | dose independent | no | NA | NA |
| 978 | 40.54 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 18 | 23 |
| 990 | 40.55 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 18 |