Os05g0119900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0119900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.76 | 0.567 | 6.69 | 0.925 | 0.834 | -1.1 | 0.321 | -1.96 | -0.415 | 19.5 | 50.93 | 1428 | -- | -- |
| 149.68 | 0.57 | 6.71 | 0.738 | 0.417 | -1.52 | 0.327 | -- | -0.422 | 20.2 | 46 | 2051 | -- | -- |
| 146.03 | 0.563 | 6.69 | 0.917 | 0.838 | -1.11 | -- | -1.97 | -0.415 | 19.5 | 51 | 1415 | -- | -- |
| 149.31 | 0.569 | 6.7 | 0.724 | 0.392 | -1.56 | -- | -- | -0.486 | 19.7 | 46.69 | 2104 | -- | -- |
| 153.79 | 0.578 | 6.7 | 0.908 | -- | -1.73 | -- | -1.47 | -0.501 | -- | 56.27 | 2104 | -- | -- |
| 191.58 | 0.649 | 6.69 | 0.763 | 0.808 | -- | 0.366 | -- | -0.405 | 19.9 | -- | -- | -- | -- |
| 191.96 | 0.649 | 6.69 | 0.753 | 0.809 | -- | -- | -- | -0.404 | 19.8 | -- | -- | -- | -- |
| 156.22 | 0.582 | 6.69 | 0.716 | -- | -1.83 | -- | -- | -0.504 | -- | 46 | 2104 | -- | -- |
| 163.28 | 0.595 | 6.71 | -- | 0.395 | -1.56 | -- | -- | -0.536 | 19.6 | 44 | 2112 | -- | -- |
| 227.44 | 0.705 | 6.67 | 0.744 | -- | -- | -- | -- | -0.415 | -- | -- | -- | -- | -- |
| 206.92 | 0.673 | 6.71 | -- | 0.804 | -- | -- | -- | -0.488 | 19.9 | -- | -- | -- | -- |
| 169.71 | 0.607 | 6.71 | -- | -- | -1.84 | -- | -- | -0.583 | -- | 44 | 2102 | -- | -- |
| 242.04 | 0.726 | 6.69 | -- | -- | -- | -- | -- | -0.498 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.35 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 20 | 132.35 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 30 | 132.54 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 39 | 132.72 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 58 | 132.99 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 12 |
| 61 | 133.00 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 9 |
| 91 | 133.44 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 102 | 133.56 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 110 | 133.59 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 117 | 133.66 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 11 | 9 |
| 120 | 133.67 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 11 | 9 |
| 123 | 133.75 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 130 | 133.79 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 133 | 133.80 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 169 | 134.04 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 170 | 134.04 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 172 | 134.04 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 183 | 134.10 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 205 | 134.19 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 210 | 134.21 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 223 | 134.28 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 12 | 11 |
| 225 | 134.29 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 228 | 134.30 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 240 | 134.37 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 18 |
| 257 | 134.46 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 8 |
| 324 | 134.78 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 342 | 134.85 | humidity | 60.0 | 14400 | > th | dose dependent | sin | 20 | NA |
| 350 | 134.88 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 366 | 134.93 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 386 | 135.00 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 418 | 135.09 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 426 | 135.12 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 7 | 11 |
| 427 | 135.12 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 438 | 135.16 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 7 | 11 |
| 453 | 135.21 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 482 | 135.29 | humidity | 90.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 588 | 135.57 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 605 | 135.60 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 617 | 135.62 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 630 | 135.65 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 634 | 135.65 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 655 | 135.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 14 |
| 657 | 135.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 14 |
| 663 | 135.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 14 |
| 670 | 135.75 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 675 | 135.76 | humidity | 90.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 695 | 135.83 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 786 | 136.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 18 |
| 798 | 136.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 18 |
| 803 | 136.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 18 |
| 832 | 136.09 | temperature | 25.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 871 | 136.18 | temperature | 25.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 881 | 136.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 22 |
| 889 | 136.22 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 902 | 136.24 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 920 | 136.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 22 |
| 925 | 136.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 22 |