Os05g0119000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein 245 family protein.
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Os05g0119000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein 245 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.16 | 0.388 | 11.2 | -0.0884 | 0.611 | -6.13 | -0.212 | 16.6 | -0.201 | 5.24 | 0.9997 | 416 | -- | -- |
| 71.1 | 0.393 | 11.2 | -0.282 | 0.563 | -1.63 | -0.208 | -- | -0.205 | 5.31 | 0.9063 | 413 | -- | -- |
| 68.26 | 0.385 | 11.2 | -0.0825 | 0.61 | -6.07 | -- | 16.6 | -0.2 | 5.23 | 0.9582 | 414 | -- | -- |
| 68.33 | 0.385 | 11.2 | -0.342 | 0.622 | -1.3 | -- | -- | -0.206 | 5.22 | 1 | 532 | -- | -- |
| 87.65 | 0.436 | 11.2 | -0.0466 | -- | -6.23 | -- | 16.8 | -0.186 | -- | 0.8729 | 413 | -- | -- |
| 78.15 | 0.414 | 11.2 | -0.44 | 0.641 | -- | -0.0925 | -- | -0.179 | 5.57 | -- | -- | -- | -- |
| 78.17 | 0.414 | 11.2 | -0.44 | 0.64 | -- | -- | -- | -0.178 | 5.58 | -- | -- | -- | -- |
| 88.27 | 0.438 | 11.2 | -0.329 | -- | -1.43 | -- | -- | -0.176 | -- | 1.174 | 415 | -- | -- |
| 71.09 | 0.393 | 11.2 | -- | 0.611 | -1.42 | -- | -- | -0.171 | 5.2 | 1.007 | 532 | -- | -- |
| 99.46 | 0.466 | 11.2 | -0.42 | -- | -- | -- | -- | -0.163 | -- | -- | -- | -- | -- |
| 83.28 | 0.427 | 11.2 | -- | 0.633 | -- | -- | -- | -0.129 | 5.61 | -- | -- | -- | -- |
| 90.62 | 0.443 | 11.2 | -- | -- | -1.53 | -- | -- | -0.156 | -- | 1.164 | 520 | -- | -- |
| 104.1 | 0.476 | 11.2 | -- | -- | -- | -- | -- | -0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.38 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 2 | 66.48 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 5 | 66.82 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 6 | 66.90 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 12 | 67.15 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 7 |
| 24 | 67.57 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 17 | 13 |
| 29 | 67.62 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 38 | 67.76 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 54 | 67.98 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 14 |
| 60 | 68.02 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 13 | 6 |
| 64 | 68.04 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 11 |
| 68 | 68.07 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 11 |
| 73 | 68.10 | wind | 1.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 78 | 68.13 | wind | 1.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 100 | 68.20 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 115 | 68.26 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 15 |
| 124 | 68.29 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 16 | 12 |
| 126 | 68.29 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 130 | 68.30 | wind | 9.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 133 | 68.31 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 7 | 12 |
| 138 | 68.32 | wind | 1.0 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 139 | 68.32 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 13 | 15 |
| 148 | 68.35 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 149 | 68.35 | wind | 1.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 156 | 68.36 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 13 | 8 |
| 162 | 68.38 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 15 |
| 171 | 68.39 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 5 | 14 |
| 174 | 68.39 | wind | 1.0 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 179 | 68.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 201 | 68.43 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 15 |
| 202 | 68.43 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 203 | 68.44 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 212 | 68.45 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 18 |
| 213 | 68.45 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 5 |
| 215 | 68.46 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 238 | 68.50 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 18 |
| 239 | 68.50 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 247 | 68.51 | precipitation | 0.1 | 720 | > th | dose dependent | sin | 22 | NA |
| 256 | 68.52 | precipitation | 0.1 | 720 | > th | dose dependent | sin | 19 | NA |
| 263 | 68.54 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 267 | 68.54 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 290 | 68.57 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 15 | 10 |
| 308 | 68.59 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 12 | 19 |
| 311 | 68.60 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 329 | 68.65 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 332 | 68.65 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 334 | 68.65 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 8 | 17 |
| 349 | 68.68 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 13 |
| 359 | 68.69 | wind | 1.0 | 14400 | < th | dose independent | rect. | 12 | 19 |
| 360 | 68.69 | wind | 1.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 372 | 68.70 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 8 | 12 |
| 396 | 68.74 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 397 | 68.74 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 5 |
| 410 | 68.75 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 16 |
| 416 | 68.75 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 5 | 14 |
| 457 | 68.79 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 8 | 20 |
| 468 | 68.81 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 13 | 12 |
| 499 | 68.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 512 | 68.86 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 12 |
| 549 | 68.89 | precipitation | 0.1 | 720 | > th | dose independent | sin | 17 | NA |
| 611 | 68.93 | wind | 1.0 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 615 | 68.93 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 22 |
| 635 | 68.94 | wind | 1.0 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 666 | 68.97 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 754 | 69.05 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 22 |
| 774 | 69.07 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 18 |
| 777 | 69.07 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 22 |
| 778 | 69.08 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 779 | 69.08 | wind | 5.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 800 | 69.09 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 832 | 69.11 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 12 | 22 |
| 847 | 69.12 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 15 |
| 852 | 69.13 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 945 | 69.21 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 954 | 69.22 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 13 |
| 956 | 69.22 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 16 |
| 985 | 69.25 | wind | 1.0 | 14400 | < th | dose independent | no | NA | NA |