Os05g0116100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dehydroascorbate reductase.
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Os05g0116100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dehydroascorbate reductase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.4 | 0.386 | 13.6 | -0.748 | 0.861 | -2.78 | 0.444 | -2.54 | -0.284 | 15.7 | 1.748 | 1481 | -- | -- |
| 69.85 | 0.389 | 13.7 | -1.03 | 0.983 | -2.26 | 0.729 | -- | -0.358 | 15.1 | 2.348 | 1452 | -- | -- |
| 67.76 | 0.383 | 13.6 | -0.731 | 0.819 | -2.81 | -- | -2.58 | -0.285 | 16 | 1.842 | 1490 | -- | -- |
| 71.33 | 0.393 | 13.7 | -0.978 | 0.914 | -2.32 | -- | -- | -0.34 | 15.6 | 2.4 | 1472 | -- | -- |
| 75.63 | 0.405 | 13.6 | -0.787 | -- | -2.67 | -- | -1.62 | -0.254 | -- | 2.256 | 1673 | -- | -- |
| 132.54 | 0.54 | 13.6 | -0.55 | 1.01 | -- | 0.547 | -- | -0.0287 | 14.8 | -- | -- | -- | -- |
| 133.53 | 0.541 | 13.6 | -0.537 | 1.02 | -- | -- | -- | -0.0251 | 14.9 | -- | -- | -- | -- |
| 77.89 | 0.411 | 13.7 | -0.889 | -- | -2.52 | -- | -- | -0.296 | -- | 2.47 | 1693 | -- | -- |
| 95.24 | 0.455 | 13.7 | -- | 0.851 | -2.05 | -- | -- | -0.334 | 15.7 | 2.956 | 1492 | -- | -- |
| 193.19 | 0.649 | 13.6 | -0.58 | -- | -- | -- | -- | -0.0513 | -- | -- | -- | -- | -- |
| 141.14 | 0.556 | 13.6 | -- | 1.03 | -- | -- | -- | 0.0347 | 14.9 | -- | -- | -- | -- |
| 96.04 | 0.456 | 13.6 | -- | -- | -2.27 | -- | -- | -0.171 | -- | 3.268 | 1756 | -- | -- |
| 202.08 | 0.664 | 13.6 | -- | -- | -- | -- | -- | 0.0131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.59 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 3 | 63.97 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 12 | 64.85 | humidity | 70 | 1440 | > th | dose dependent | rect. | 7 | 14 |
| 36 | 65.93 | humidity | 80 | 1440 | < th | dose independent | sin | 23 | NA |
| 52 | 66.55 | humidity | 80 | 1440 | > th | dose independent | sin | 23 | NA |
| 62 | 66.82 | humidity | 70 | 1440 | > th | dose dependent | sin | 22 | NA |
| 259 | 69.41 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 20 |
| 262 | 69.42 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 273 | 69.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 274 | 69.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 16 |
| 316 | 69.73 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 374 | 70.16 | radiation | 1 | 1440 | < th | dose dependent | rect. | 3 | 22 |
| 376 | 70.16 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 378 | 70.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 21 |
| 382 | 70.18 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 386 | 70.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 403 | 70.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 3 | 18 |
| 407 | 70.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 23 |
| 409 | 70.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 3 | 16 |
| 437 | 70.30 | radiation | 1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 458 | 70.39 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 495 | 70.65 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 524 | 70.82 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 529 | 70.84 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 565 | 71.12 | humidity | 60 | 1440 | > th | dose dependent | no | NA | NA |
| 596 | 71.27 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 21 |
| 603 | 71.28 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 612 | 71.30 | humidity | 60 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 613 | 71.31 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 628 | 71.35 | radiation | 1 | 1440 | < th | dose independent | rect. | 22 | 22 |
| 631 | 71.35 | radiation | 1 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 634 | 71.36 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 640 | 71.37 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 644 | 71.37 | radiation | 1 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 653 | 71.39 | radiation | 1 | 1440 | < th | dose independent | rect. | 3 | 17 |
| 659 | 71.39 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 691 | 71.44 | humidity | 90 | 1440 | < th | dose dependent | rect. | 8 | 15 |
| 693 | 71.45 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 23 |
| 713 | 71.55 | radiation | 1 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 729 | 71.61 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 733 | 71.62 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 751 | 71.64 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 801 | 71.66 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 819 | 71.74 | radiation | 1 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 823 | 71.76 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 856 | 71.84 | humidity | 60 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 864 | 71.88 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 872 | 71.90 | radiation | 1 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 932 | 72.15 | humidity | 90 | 1440 | < th | dose dependent | sin | 20 | NA |
| 933 | 72.16 | radiation | 1 | 1440 | < th | dose independent | sin | 0 | NA |
| 964 | 72.31 | radiation | 1 | 1440 | > th | dose independent | sin | 0 | NA |