Os05g0115800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MAP kinase phosphatase (Fragment).
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Os05g0115800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to MAP kinase phosphatase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.62 | 0.395 | 10.7 | 0.864 | 1.26 | 0.846 | -0.159 | -0.865 | 0.245 | 20.7 | 74.99 | 837 | -- | -- |
| 71.55 | 0.394 | 10.8 | 0.815 | 1.25 | 0.831 | 0.211 | -- | 0.231 | 20.7 | 74.62 | 848 | -- | -- |
| 70.67 | 0.392 | 10.7 | 0.858 | 1.26 | 0.843 | -- | -0.734 | 0.243 | 20.8 | 74.66 | 844 | -- | -- |
| 71.67 | 0.394 | 10.8 | 0.795 | 1.25 | 0.827 | -- | -- | 0.229 | 20.8 | 74.89 | 848 | -- | -- |
| 115.55 | 0.503 | 10.7 | 0.698 | -- | 0.241 | -- | -0.174 | 0.178 | -- | 83.9 | 1455 | -- | -- |
| 84.21 | 0.43 | 10.7 | 0.711 | 0.823 | -- | 0.128 | -- | 0.178 | 20.7 | -- | -- | -- | -- |
| 84.26 | 0.43 | 10.7 | 0.707 | 0.822 | -- | -- | -- | 0.178 | 20.7 | -- | -- | -- | -- |
| 115.32 | 0.5 | 10.7 | 0.668 | -- | 0.724 | -- | -- | 0.214 | -- | 83.14 | 1455 | -- | -- |
| 88.76 | 0.439 | 10.8 | -- | 1.24 | 0.839 | -- | -- | 0.208 | 20.8 | 74.11 | 847 | -- | -- |
| 122.42 | 0.517 | 10.7 | 0.705 | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
| 97.42 | 0.462 | 10.8 | -- | 0.82 | -- | -- | -- | 0.0989 | 20.7 | -- | -- | -- | -- |
| 127.21 | 0.525 | 10.7 | -- | -- | 0.8 | -- | -- | 0.19 | -- | 84 | 1460 | -- | -- |
| 135.51 | 0.543 | 10.7 | -- | -- | -- | -- | -- | 0.0924 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.75 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 2 | 63.75 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 2 |
| 7 | 65.15 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 10 | 65.72 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 16 | 66.65 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 20 | 67.44 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 21 | 67.60 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 23 | 67.81 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 25 | 67.81 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 27 | 67.81 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 78 | 67.81 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 80 | 67.81 | humidity | 60 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 82 | 67.81 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 139 | 68.08 | radiation | 1 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 149 | 68.08 | radiation | 1 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 159 | 68.16 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 160 | 68.18 | humidity | 60 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 162 | 68.29 | humidity | 60 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 169 | 68.57 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 170 | 68.57 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 182 | 68.69 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 191 | 68.90 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 202 | 68.95 | radiation | 10 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 203 | 68.97 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 205 | 68.98 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 14 | 10 |
| 213 | 69.10 | humidity | 60 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 225 | 69.22 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 226 | 69.22 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 227 | 69.25 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 10 |
| 237 | 69.25 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 242 | 69.35 | radiation | 1 | 90 | < th | dose independent | rect. | 5 | 12 |
| 257 | 69.50 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 265 | 69.56 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 267 | 69.58 | humidity | 60 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 269 | 69.59 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 14 |
| 271 | 69.59 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 272 | 69.59 | radiation | 1 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 274 | 69.60 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 10 | 19 |
| 280 | 69.64 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 9 | 22 |
| 284 | 69.66 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 11 | 22 |
| 294 | 69.71 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 295 | 69.71 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 10 |
| 297 | 69.71 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 11 | 16 |
| 309 | 69.74 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 332 | 69.79 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 10 | 18 |
| 354 | 69.86 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 17 |
| 370 | 69.92 | radiation | 1 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 379 | 69.95 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 11 | 16 |
| 381 | 69.96 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 390 | 70.01 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 12 | 14 |
| 418 | 70.11 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 457 | 70.25 | atmosphere | 995 | 43200 | < th | dose independent | sin | 17 | NA |
| 476 | 70.31 | atmosphere | 995 | 43200 | > th | dose independent | no | NA | NA |
| 477 | 70.31 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 522 | 70.43 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 13 | 13 |
| 561 | 70.56 | radiation | 20 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 567 | 70.58 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 570 | 70.59 | radiation | 1 | 720 | > th | dose independent | sin | 21 | NA |
| 574 | 70.60 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 592 | 70.68 | atmosphere | 995 | 43200 | > th | dose independent | sin | 17 | NA |
| 595 | 70.69 | radiation | 1 | 720 | < th | dose independent | rect. | 9 | 10 |
| 626 | 70.82 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 639 | 70.84 | radiation | 1 | 720 | < th | dose dependent | sin | 22 | NA |
| 677 | 70.90 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 696 | 70.94 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 11 |
| 721 | 70.98 | atmosphere | 995 | 43200 | < th | dose independent | no | NA | NA |
| 722 | 70.98 | radiation | 10 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 724 | 70.98 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 22 |
| 787 | 71.12 | radiation | 1 | 720 | < th | dose independent | sin | 22 | NA |
| 832 | 71.18 | humidity | 70 | 720 | > th | dose dependent | rect. | 10 | 13 |
| 866 | 71.30 | humidity | 80 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 870 | 71.31 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 892 | 71.34 | humidity | 70 | 10 | > th | dose dependent | rect. | 21 | 23 |