Os05g0115100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1635 family protein.
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Os05g0115100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1635 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.72 | 0.49 | 6.35 | -0.577 | 0.859 | -0.681 | 1.7 | 0.702 | -0.378 | 18.2 | 29.4 | 4109 | -- | -- |
| 108.79 | 0.486 | 6.36 | -0.691 | 0.846 | -0.597 | 1.85 | -- | -0.377 | 18.3 | 29.13 | 4007 | -- | -- |
| 114.89 | 0.499 | 6.34 | -0.584 | 0.87 | -0.673 | -- | 0.702 | -0.352 | 17.7 | 29.21 | 4042 | -- | -- |
| 114.91 | 0.499 | 6.34 | -0.717 | 0.869 | -0.506 | -- | -- | -0.325 | 17.6 | 28.24 | 3050 | -- | -- |
| 154.79 | 0.579 | 6.33 | -0.649 | -- | -0.675 | -- | 0.399 | -0.377 | -- | 29.5 | 4149 | -- | -- |
| 120.39 | 0.514 | 6.36 | -0.886 | 0.876 | -- | 1.67 | -- | -0.39 | 18 | -- | -- | -- | -- |
| 126.18 | 0.526 | 6.35 | -0.897 | 0.894 | -- | -- | -- | -0.382 | 17.4 | -- | -- | -- | -- |
| 154.58 | 0.579 | 6.33 | -0.754 | -- | -0.508 | -- | -- | -0.355 | -- | 28.7 | 2826 | -- | -- |
| 127.54 | 0.526 | 6.32 | -- | 0.886 | -0.634 | -- | -- | -0.226 | 17.7 | 28.29 | 2941 | -- | -- |
| 167.81 | 0.605 | 6.34 | -0.927 | -- | -- | -- | -- | -0.404 | -- | -- | -- | -- | -- |
| 147.36 | 0.568 | 6.33 | -- | 0.909 | -- | -- | -- | -0.282 | 17.4 | -- | -- | -- | -- |
| 165.62 | 0.599 | 6.3 | -- | -- | -0.709 | -- | -- | -0.201 | -- | 27.6 | 2788 | -- | -- |
| 190.46 | 0.644 | 6.32 | -- | -- | -- | -- | -- | -0.301 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.59 | humidity | 80.0 | 720 | > th | dose independent | rect. | 19 | 6 |
| 7 | 105.34 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 13 | 105.94 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 15 | 106.00 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 47 | 106.94 | wind | 1.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 58 | 107.24 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 70 | 107.44 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 7 |
| 72 | 107.46 | radiation | 10.0 | 30 | < th | dose independent | rect. | 18 | 14 |
| 85 | 107.59 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 87 | 107.60 | humidity | 80.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 94 | 107.70 | wind | 1.0 | 4320 | > th | dose independent | rect. | 2 | 3 |
| 96 | 107.74 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 98 | 107.77 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 22 | 3 |
| 103 | 107.80 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 109 | 107.85 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 110 | 107.86 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 111 | 107.87 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 118 | 107.94 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 21 | 5 |
| 121 | 107.96 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 13 |
| 124 | 107.99 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 125 | 108.00 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 132 | 108.04 | wind | 1.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 144 | 108.14 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 148 | 108.15 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 19 | 13 |
| 150 | 108.16 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 153 | 108.17 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 16 | 8 |
| 154 | 108.18 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 172 | 108.21 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 177 | 108.22 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 186 | 108.24 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 12 | 7 |
| 216 | 108.31 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 15 | 10 |
| 219 | 108.32 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 223 | 108.33 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 12 | 8 |
| 224 | 108.33 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 18 | 14 |
| 225 | 108.33 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 248 | 108.35 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 283 | 108.44 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 293 | 108.46 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 303 | 108.47 | wind | 1.0 | 4320 | < th | dose independent | rect. | 2 | 3 |
| 304 | 108.47 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 314 | 108.48 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 319 | 108.49 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 331 | 108.49 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 12 |
| 335 | 108.50 | wind | 1.0 | 30 | > th | dose independent | sin | 3 | NA |
| 344 | 108.51 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 395 | 108.56 | humidity | 80.0 | 720 | < th | dose independent | rect. | 18 | 4 |
| 415 | 108.59 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 434 | 108.61 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 475 | 108.65 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 499 | 108.68 | humidity | 80.0 | 720 | > th | dose independent | sin | 15 | NA |
| 500 | 108.68 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 3 |
| 533 | 108.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 13 |
| 538 | 108.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 13 |
| 550 | 108.74 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 552 | 108.74 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 583 | 108.77 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 592 | 108.79 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 624 | 108.82 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 626 | 108.82 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 16 | NA |
| 640 | 108.84 | temperature | 25.0 | 720 | < th | dose independent | rect. | 6 | 1 |
| 656 | 108.86 | temperature | 20.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 662 | 108.86 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 668 | 108.87 | temperature | 25.0 | 720 | < th | dose independent | rect. | 20 | 13 |
| 673 | 108.87 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 685 | 108.88 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 689 | 108.89 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 705 | 108.89 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 742 | 108.91 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 6 | 21 |
| 743 | 108.92 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 751 | 108.93 | temperature | 20.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 836 | 109.02 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 886 | 109.05 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 900 | 109.06 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 915 | 109.07 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 926 | 109.08 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 17 |
| 993 | 109.12 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |