Os05g0113200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0113200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.49 | 0.516 | 8.05 | 0.59 | 0.938 | -1.58 | 0.571 | 0.264 | -0.413 | 9.24 | 22.2 | 1501 | -- | -- |
| 120.64 | 0.512 | 8.06 | 0.503 | 0.936 | -1.58 | 0.571 | -- | -0.433 | 9.21 | 22.16 | 1479 | -- | -- |
| 121.63 | 0.514 | 8.05 | 0.602 | 0.933 | -1.58 | -- | 0.251 | -0.414 | 9.26 | 22.16 | 1480 | -- | -- |
| 121.79 | 0.514 | 8.06 | 0.522 | 0.933 | -1.58 | -- | -- | -0.434 | 9.25 | 22.13 | 1479 | -- | -- |
| 152.96 | 0.576 | 8.08 | 0.508 | -- | -1.54 | -- | 0.182 | -0.417 | -- | 22.2 | 850 | -- | -- |
| 211.4 | 0.682 | 8.18 | -0.078 | 0.939 | -- | 0.48 | -- | -0.955 | 9.45 | -- | -- | -- | -- |
| 212.24 | 0.682 | 8.18 | -0.0599 | 0.936 | -- | -- | -- | -0.955 | 9.5 | -- | -- | -- | -- |
| 153.06 | 0.576 | 8.08 | 0.444 | -- | -1.55 | -- | -- | -0.429 | -- | 22.23 | 847 | -- | -- |
| 127.88 | 0.527 | 8.07 | -- | 0.933 | -1.44 | -- | -- | -0.518 | 9.14 | 22.23 | 1430 | -- | -- |
| 263.78 | 0.759 | 8.2 | -0.0663 | -- | -- | -- | -- | -0.952 | -- | -- | -- | -- | -- |
| 212.33 | 0.682 | 8.18 | -- | 0.936 | -- | -- | -- | -0.948 | 9.5 | -- | -- | -- | -- |
| 157.96 | 0.585 | 8.1 | -- | -- | -1.47 | -- | -- | -0.503 | -- | 22.28 | 841 | -- | -- |
| 263.9 | 0.758 | 8.2 | -- | -- | -- | -- | -- | -0.945 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 19 | 124.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 26 | 124.81 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 40 | 125.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 60 | 125.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 61 | 125.49 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 93 | 126.03 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 120 | 126.36 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 226 | 127.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 272 | 127.88 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 466 | 129.47 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 471 | 129.58 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 478 | 129.63 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 481 | 129.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 551 | 130.26 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 581 | 130.62 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 697 | 131.89 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 714 | 132.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 731 | 132.36 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 764 | 132.78 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 830 | 133.38 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 833 | 133.39 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 933 | 133.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 950 | 134.04 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |