Os05g0112900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
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Os05g0112900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein prenyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.56 | 0.485 | 3.42 | 1.89 | 0.918 | -1.71 | 0.381 | 25.1 | 0.126 | 20 | 30.2 | 446 | -- | -- |
| 123.95 | 0.523 | 3.62 | 0.339 | 1.12 | 0.93 | 0.862 | -- | 0.0856 | 19.9 | 30.2 | 446 | -- | -- |
| 106.96 | 0.482 | 3.42 | 1.9 | 0.914 | -1.73 | -- | 25.4 | 0.129 | 19.9 | 30.2 | 446 | -- | -- |
| 112.74 | 0.495 | 3.6 | 0.217 | 0.844 | 1.07 | -- | -- | 0.103 | 20.2 | 28.32 | 398 | -- | -- |
| 145.86 | 0.562 | 3.37 | 1.98 | -- | -1.36 | -- | 26.8 | 0.158 | -- | 30.2 | 489 | -- | -- |
| 130.98 | 0.537 | 3.62 | 0.387 | 1.17 | -- | 0.915 | -- | 0.0533 | 19.6 | -- | -- | -- | -- |
| 133.28 | 0.541 | 3.62 | 0.366 | 1.17 | -- | -- | -- | 0.0553 | 19.5 | -- | -- | -- | -- |
| 137.6 | 0.546 | 3.62 | 0.0774 | -- | 1.54 | -- | -- | -0.0771 | -- | 24.93 | 526 | -- | -- |
| 113.86 | 0.497 | 3.62 | -- | 0.813 | 1.13 | -- | -- | 0.0421 | 20.4 | 27.62 | 406 | -- | -- |
| 206.56 | 0.672 | 3.59 | 0.348 | -- | -- | -- | -- | 0.0368 | -- | -- | -- | -- | -- |
| 136.81 | 0.547 | 3.63 | -- | 1.17 | -- | -- | -- | 0.0145 | 19.5 | -- | -- | -- | -- |
| 137.75 | 0.547 | 3.62 | -- | -- | 1.56 | -- | -- | -0.0822 | -- | 24.98 | 526 | -- | -- |
| 209.75 | 0.676 | 3.6 | -- | -- | -- | -- | -- | -0.00183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.39 | temperature | 30 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 2 | 107.49 | temperature | 30 | 720 | > th | dose dependent | rect. | 8 | 6 |
| 20 | 107.59 | temperature | 30 | 270 | < th | dose independent | rect. | 8 | 15 |
| 40 | 108.04 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 13 | 8 |
| 41 | 108.11 | temperature | 30 | 720 | > th | dose dependent | sin | 7 | NA |
| 43 | 108.15 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 4 |
| 44 | 108.21 | temperature | 30 | 270 | < th | dose independent | sin | 20 | NA |
| 45 | 108.24 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 22 |
| 88 | 108.69 | temperature | 30 | 270 | < th | dose independent | rect. | 22 | 23 |
| 89 | 108.71 | temperature | 30 | 720 | > th | dose independent | sin | 8 | NA |
| 102 | 108.88 | temperature | 30 | 270 | > th | dose dependent | rect. | 11 | 8 |
| 118 | 108.90 | temperature | 30 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 136 | 108.96 | temperature | 30 | 270 | > th | dose dependent | sin | 20 | NA |
| 162 | 109.07 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 23 |
| 178 | 109.09 | temperature | 30 | 270 | > th | dose dependent | no | NA | NA |
| 274 | 109.16 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 11 |
| 276 | 109.16 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 280 | 109.21 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 23 |
| 327 | 109.43 | temperature | 30 | 270 | > th | dose independent | rect. | 10 | 9 |
| 409 | 109.81 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 4 |
| 425 | 109.82 | temperature | 30 | 270 | > th | dose independent | sin | 21 | NA |
| 473 | 110.03 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 6 |
| 483 | 110.16 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 14 |
| 514 | 110.33 | temperature | 30 | 270 | > th | dose independent | no | NA | NA |
| 652 | 110.58 | temperature | 30 | 270 | < th | dose independent | no | NA | NA |
| 653 | 110.58 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 8 |
| 689 | 110.80 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 9 |
| 708 | 110.85 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 2 |
| 762 | 111.16 | temperature | 30 | 720 | < th | dose independent | sin | 5 | NA |
| 796 | 111.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 799 | 111.43 | temperature | 30 | 720 | < th | dose independent | sin | 10 | NA |
| 912 | 111.67 | temperature | 30 | 720 | < th | dose independent | rect. | 19 | 17 |