Os05g0111300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to B22EL8 protein.
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Os05g0111300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to B22EL8 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 337.56 | 0.863 | 12.3 | -4.36 | 0.314 | 1.36 | -1.09 | 12.7 | 0.693 | 16.1 | 1.945 | 5169 | 19 | -- |
| 418.42 | 0.953 | 11.8 | -2.61 | 0.29 | 1.6 | -0.0172 | -- | 1.69 | 14.1 | 60.17 | 24259 | 16.2 | -- |
| 340.13 | 0.859 | 12.3 | -4.32 | 0.278 | 1.38 | -- | 12.4 | 0.682 | 16.3 | 1.95 | 5164 | 18.8 | -- |
| 405.95 | 0.938 | 11.8 | -2.53 | 0.272 | 1.59 | -- | -- | 1.73 | 14.5 | 90.8 | 24478 | 2.35 | -- |
| 345.43 | 0.866 | 12.3 | -4.39 | -- | 1.22 | -- | 12.2 | 0.681 | -- | 2.05 | 5168 | 18.8 | -- |
| 501.18 | 1.05 | 11.9 | -2.05 | 0.256 | -- | -0.958 | -- | 1.21 | 16.3 | -- | -- | -- | -- |
| 502.04 | 1.05 | 11.9 | -2.06 | 0.289 | -- | -- | -- | 1.21 | 14 | -- | -- | -- | -- |
| 406.82 | 0.939 | 11.8 | -2.61 | -- | 1.72 | -- | -- | 1.73 | -- | 157 | 24447 | 2.69 | -- |
| 555.76 | 1.1 | 11.8 | -- | 0.184 | 1.46 | -- | -- | 1.89 | 12.4 | 169.8 | 22959 | 23.6 | -- |
| 507.07 | 1.05 | 11.9 | -2.07 | -- | -- | -- | -- | 1.2 | -- | -- | -- | -- | -- |
| 614.06 | 1.16 | 11.9 | -- | 0.328 | -- | -- | -- | 1.44 | 14.1 | -- | -- | -- | -- |
| 557.45 | 1.1 | 11.8 | -- | -- | 1.49 | -- | -- | 1.9 | -- | 99.54 | 22856 | 0.147 | -- |
| 620.5 | 1.16 | 11.9 | -- | -- | -- | -- | -- | 1.43 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 330.89 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 2 | 332.08 | wind | 5 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 5 | 333.56 | temperature | 10 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 6 | 333.57 | temperature | 30 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 10 | 334.35 | temperature | 10 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 11 | 334.42 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 30 | 335.71 | temperature | 10 | 14400 | > th | dose dependent | rect. | 5 | 10 |
| 37 | 336.03 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 79 | 337.04 | temperature | 10 | 14400 | > th | dose dependent | sin | 3 | NA |
| 89 | 337.16 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 135 | 337.96 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 170 | 338.40 | wind | 5 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 180 | 338.53 | temperature | 15 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 214 | 338.86 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 272 | 339.43 | wind | 7 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 368 | 340.00 | temperature | 10 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 439 | 340.37 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |
| 473 | 340.51 | temperature | 10 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 514 | 340.70 | temperature | 10 | 14400 | > th | dose dependent | rect. | 8 | 23 |
| 563 | 341.03 | temperature | 30 | 14400 | < th | dose dependent | sin | 5 | NA |
| 581 | 341.14 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 693 | 341.79 | wind | 1 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 737 | 342.07 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 747 | 342.15 | wind | 5 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 893 | 343.03 | temperature | 25 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 923 | 343.22 | temperature | 25 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 983 | 343.62 | temperature | 25 | 43200 | > th | dose independent | rect. | 10 | 5 |