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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0110200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : DVL family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.85 (0.0254) R2 : 0.0113
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.122 (0.0536) R2dN8 : 0.0145 R2N8 : 0.0113
σ : 0.479
deviance : 105.37
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.19 0.477 2.86 -0.0779 0.0196 -0.154 0.174 0.177 0.0533 2.18 1005 143 -- --
103.34 0.473 2.86 -0.0736 0.018 -0.152 0.182 -- 0.0585 1.86 1005 153 -- --
103.25 0.473 2.87 -0.0898 0.0352 -0.156 -- 0.2 0.05 5.66 1005 138 -- --
103.42 0.474 2.86 -0.0779 0.0332 -0.149 -- -- 0.06 5.6 1005 150 -- --
103.32 0.473 2.87 -0.0823 -- -0.156 -- 0.183 0.0507 -- 1005 138 -- --
104.97 0.48 2.85 -0.0781 0.0541 -- 0.167 -- 0.113 4.25 -- -- -- --
105.02 0.48 2.85 -0.0795 0.0615 -- -- -- 0.112 5.71 -- -- -- --
103.49 0.474 2.87 -0.0785 -- -0.154 -- -- 0.0573 -- 1005 150 -- --
103.59 0.474 2.86 -- 0.032 -0.151 -- -- 0.065 5.57 1005 146 -- --
105.21 0.479 2.85 -0.0775 -- -- -- -- 0.113 -- -- -- -- --
105.18 0.48 2.85 -- 0.0602 -- -- -- 0.121 5.77 -- -- -- --
103.65 0.474 2.86 -- -- -0.153 -- -- 0.0663 -- 1005 143 -- --
105.37 0.479 2.85 -- -- -- -- -- 0.122 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 101.31 radiation 30.0 10 < th dose independent rect. 12 1
5 101.55 humidity 80.0 30 < th dose independent rect. 1 5
9 101.55 humidity 80.0 30 < th dose dependent rect. 1 5
15 101.77 humidity 60.0 10 > th dose independent rect. 24 11
16 101.82 wind 9.0 30 < th dose independent rect. 3 23
17 101.84 radiation 30.0 1440 > th dose independent rect. 16 1
32 101.86 wind 7.0 1440 > th dose independent rect. 22 1
33 101.86 radiation 40.0 30 < th dose independent rect. 11 4
37 101.91 humidity 80.0 1440 < th dose dependent rect. 21 1
40 101.93 wind 7.0 1440 > th dose dependent rect. 22 1
41 101.94 temperature 20.0 90 > th dose dependent rect. 22 1
43 101.96 radiation 10.0 1440 > th dose independent rect. 5 1
56 101.96 radiation 10.0 1440 > th dose dependent rect. 5 1
73 101.98 wind 7.0 90 > th dose dependent rect. 22 1
78 102.00 radiation 40.0 30 < th dose independent rect. 11 13
95 102.02 radiation 30.0 720 > th dose dependent rect. 16 1
126 102.05 radiation 40.0 30 < th dose dependent rect. 11 1
130 102.07 humidity 80.0 30 < th dose independent rect. 1 3
135 102.07 humidity 80.0 30 < th dose dependent rect. 1 3
139 102.10 humidity 80.0 30 < th dose independent rect. 1 1
145 102.10 atmosphere 1010.0 10 < th dose independent rect. 24 11
146 102.10 humidity 80.0 30 < th dose dependent rect. 1 1
149 102.11 temperature 10.0 1440 > th dose independent rect. 15 1
155 102.11 temperature 10.0 1440 > th dose independent rect. 16 23
163 102.12 atmosphere 1015.0 1440 < th dose independent rect. 15 1
167 102.13 wind 5.0 30 < th dose independent rect. 24 11
172 102.19 radiation 30.0 30 > th dose independent rect. 14 1
176 102.20 wind 7.0 30 < th dose independent rect. 14 1
177 102.20 humidity 60.0 30 > th dose independent rect. 14 1
178 102.20 radiation 40.0 30 < th dose independent rect. 14 1
179 102.20 radiation 40.0 10 < th dose independent rect. 24 11
180 102.21 temperature 30.0 30 < th dose independent rect. 14 1
181 102.21 atmosphere 1005.0 30 > th dose independent rect. 14 1
182 102.21 wind 5.0 10 > th dose independent rect. 9 7
184 102.21 atmosphere 1000.0 30 > th dose dependent rect. 14 1
187 102.22 humidity 90.0 30 < th dose independent rect. 14 1
192 102.22 radiation 20.0 270 < th dose dependent rect. 8 2
193 102.23 wind 5.0 30 > th dose independent rect. 14 1
195 102.23 wind 1.0 30 > th dose dependent rect. 14 1
196 102.23 wind 1.0 30 > th dose dependent rect. 9 7
197 102.24 wind 1.0 30 > th dose independent rect. 14 1
200 102.24 temperature 20.0 10 > th dose independent rect. 22 2
202 102.25 temperature 10.0 30 > th dose independent rect. 14 1
206 102.25 atmosphere 1010.0 30 < th dose independent rect. 14 1
208 102.25 radiation 1.0 30 > th dose independent rect. 14 1
211 102.25 precipitation 0.1 30 < th dose independent rect. 14 1
212 102.25 temperature 10.0 30 > th dose independent rect. 15 23
213 102.25 temperature 10.0 30 > th dose dependent rect. 14 1
214 102.25 radiation 1.0 30 > th dose dependent rect. 14 1
216 102.25 precipitation 0.1 30 < th dose dependent rect. 14 1
218 102.26 temperature 25.0 30 > th dose independent rect. 14 1
222 102.26 radiation 40.0 90 < th dose dependent rect. 21 15
237 102.31 humidity 90.0 30 < th dose dependent rect. 14 1
239 102.32 humidity 50.0 30 > th dose dependent rect. 14 1
241 102.33 wind 1.0 90 > th dose independent rect. 22 1
246 102.34 wind 9.0 30 < th dose dependent rect. 14 1
251 102.36 atmosphere 1015.0 30 < th dose dependent rect. 14 1
258 102.37 radiation 20.0 270 < th dose dependent rect. 19 16
266 102.40 wind 7.0 10 > th dose independent sin 7 NA
268 102.40 temperature 30.0 30 < th dose dependent rect. 2 1
280 102.44 temperature 15.0 4320 > th dose independent rect. 12 4
281 102.44 radiation 20.0 90 < th dose dependent rect. 10 1
302 102.47 wind 7.0 90 < th dose independent rect. 23 23
324 102.52 wind 3.0 10 < th dose independent rect. 2 1
330 102.52 humidity 80.0 1440 < th dose dependent rect. 20 11
331 102.53 wind 3.0 4320 > th dose independent rect. 1 1
332 102.53 atmosphere 1005.0 10 > th dose independent rect. 2 1
338 102.54 wind 7.0 10 < th dose independent rect. 23 23
342 102.54 temperature 10.0 30 > th dose dependent rect. 24 11
344 102.55 wind 7.0 10 < th dose independent sin 6 NA
346 102.55 wind 5.0 10 > th dose independent rect. 9 3
348 102.55 atmosphere 1000.0 10 > th dose dependent rect. 2 1
356 102.56 wind 3.0 4320 < th dose independent rect. 1 1
359 102.56 radiation 30.0 10 < th dose independent rect. 13 22
360 102.56 temperature 20.0 270 > th dose dependent rect. 20 1
367 102.57 wind 1.0 30 > th dose independent rect. 2 1
371 102.57 wind 7.0 10 > th dose independent rect. 21 17
377 102.58 humidity 80.0 1440 > th dose independent rect. 1 1
387 102.59 radiation 40.0 30 < th dose independent rect. 11 16
401 102.61 temperature 10.0 30 > th dose independent rect. 2 1
403 102.61 temperature 25.0 30 < th dose independent rect. 2 1
405 102.61 humidity 50.0 30 > th dose independent rect. 2 1
408 102.61 atmosphere 995.0 30 > th dose independent rect. 2 1
411 102.61 atmosphere 1010.0 30 < th dose independent rect. 2 1
413 102.61 radiation 1.0 30 < th dose independent rect. 2 1
418 102.61 precipitation 0.1 30 < th dose independent rect. 2 1
421 102.61 radiation 40.0 10 < th dose independent rect. 16 19
422 102.61 temperature 10.0 30 > th dose independent rect. 3 23
423 102.61 radiation 1.0 30 < th dose dependent rect. 2 1
430 102.61 precipitation 0.1 30 < th dose dependent rect. 2 1
443 102.63 temperature 15.0 30 > th dose independent rect. 11 13
444 102.63 wind 7.0 10 > th dose independent rect. 21 15
445 102.63 radiation 20.0 90 < th dose independent rect. 21 15
447 102.63 atmosphere 1015.0 30 < th dose dependent rect. 2 1
451 102.63 temperature 20.0 270 > th dose dependent rect. 20 3
454 102.63 humidity 80.0 1440 < th dose dependent rect. 20 13
456 102.64 humidity 80.0 720 < th dose independent rect. 1 1
466 102.64 humidity 80.0 720 < th dose dependent rect. 1 1
498 102.65 wind 9.0 30 < th dose dependent rect. 2 1
508 102.66 atmosphere 1010.0 90 < th dose independent rect. 22 1
522 102.67 wind 3.0 10 > th dose dependent rect. 9 3
525 102.67 wind 5.0 10 > th dose dependent rect. 21 19
541 102.69 humidity 60.0 10 > th dose independent rect. 3 8
543 102.69 temperature 15.0 90 > th dose independent rect. 23 23
552 102.70 wind 7.0 10 < th dose independent rect. 15 23
556 102.70 radiation 1.0 4320 < th dose dependent rect. 23 1
565 102.71 temperature 10.0 30 > th dose dependent rect. 2 1
566 102.71 humidity 50.0 30 > th dose dependent rect. 2 1
575 102.72 atmosphere 1010.0 10 < th dose independent rect. 24 9
578 102.72 wind 5.0 30 < th dose independent rect. 12 23
583 102.72 temperature 25.0 10 > th dose dependent rect. 16 19
587 102.73 temperature 10.0 1440 > th dose independent rect. 1 11
590 102.73 atmosphere 995.0 1440 > th dose independent rect. 1 11
591 102.73 temperature 10.0 1440 > th dose independent rect. 12 13
594 102.73 atmosphere 1015.0 30 < th dose independent rect. 11 13
595 102.73 radiation 20.0 270 < th dose independent rect. 19 17
628 102.74 atmosphere 1010.0 10 < th dose independent rect. 3 8
629 102.74 temperature 10.0 30 > th dose independent rect. 24 11
631 102.74 atmosphere 995.0 30 > th dose independent rect. 24 11
635 102.74 wind 5.0 10 > th dose dependent sin 5 NA
641 102.75 atmosphere 1000.0 90 > th dose independent rect. 22 1
657 102.76 precipitation 0.1 30 < th dose independent rect. 11 13
667 102.76 precipitation 0.1 30 < th dose dependent rect. 11 13
670 102.77 humidity 60.0 270 > th dose independent rect. 11 1
671 102.77 temperature 15.0 4320 > th dose independent rect. 12 2
677 102.77 wind 7.0 10 < th dose independent rect. 15 20
700 102.78 wind 5.0 270 > th dose dependent rect. 8 1
711 102.79 wind 5.0 270 > th dose independent rect. 8 2
715 102.79 radiation 30.0 30 < th dose independent rect. 13 9
741 102.80 wind 9.0 30 < th dose dependent rect. 24 11
753 102.81 precipitation 0.1 30 < th dose independent rect. 24 11
764 102.81 precipitation 0.1 30 < th dose dependent rect. 24 11
769 102.82 radiation 40.0 14400 < th dose independent rect. 16 7
770 102.82 temperature 15.0 1440 > th dose independent rect. 23 17
813 102.84 atmosphere 1015.0 30 < th dose dependent rect. 24 11
838 102.85 atmosphere 1005.0 30 > th dose dependent rect. 1 22
843 102.86 humidity 80.0 90 > th dose independent rect. 22 1
850 102.86 wind 9.0 30 < th dose independent rect. 11 13
874 102.87 atmosphere 1010.0 10 < th dose independent rect. 5 15
921 102.89 temperature 15.0 1440 > th dose independent rect. 10 15
939 102.90 temperature 15.0 1440 > th dose independent rect. 23 3
945 102.90 humidity 60.0 10 > th dose independent rect. 16 19
949 102.90 humidity 50.0 30 > th dose dependent rect. 11 1
950 102.90 humidity 50.0 270 > th dose dependent rect. 11 1
961 102.90 atmosphere 1000.0 10 > th dose dependent rect. 1 15
976 102.91 wind 5.0 30 < th dose independent rect. 3 17