Os05g0110100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0110100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.06 | 0.373 | 15.3 | -0.637 | 2.07 | -0.693 | 0.443 | -1.89 | 0.144 | 23.4 | 25.63 | 486 | -- | -- |
| 67.19 | 0.382 | 15.4 | -0.941 | 2.07 | -0.543 | 0.552 | -- | 0.0751 | 23.3 | 28.5 | 529 | -- | -- |
| 63.81 | 0.372 | 15.3 | -0.627 | 2.06 | -0.697 | -- | -2.01 | 0.145 | 23.4 | 25.52 | 523 | -- | -- |
| 68.5 | 0.385 | 15.4 | -1.02 | 2.05 | -0.564 | -- | -- | 0.0582 | 23.4 | 28.93 | 557 | -- | -- |
| 281.48 | 0.781 | 15.3 | -0.866 | -- | -2.13 | -- | -2.56 | -0.141 | -- | 29.6 | 832 | -- | -- |
| 72.33 | 0.399 | 15.3 | -0.819 | 2.12 | -- | 0.6 | -- | 0.196 | 23.2 | -- | -- | -- | -- |
| 73.86 | 0.402 | 15.3 | -0.844 | 2.12 | -- | -- | -- | 0.193 | 23.2 | -- | -- | -- | -- |
| 287.66 | 0.79 | 15.4 | -1.34 | -- | -2.05 | -- | -- | -0.111 | -- | 232.2 | 844 | -- | -- |
| 92.16 | 0.447 | 15.3 | -- | 2.09 | -0.195 | -- | -- | 0.263 | 23.3 | 38.33 | 480 | -- | -- |
| 354.88 | 0.88 | 15.3 | -0.792 | -- | -- | -- | -- | 0.212 | -- | -- | -- | -- | -- |
| 92.64 | 0.45 | 15.3 | -- | 2.11 | -- | -- | -- | 0.287 | 23.2 | -- | -- | -- | -- |
| 319.87 | 0.836 | 15.2 | -- | -- | 1.83 | -- | -- | 0.509 | -- | 256.6 | 827 | -- | -- |
| 371.44 | 0.9 | 15.3 | -- | -- | -- | -- | -- | 0.3 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.58 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 2 | 17 |
| 5 | 60.26 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 2 | 15 |
| 13 | 60.69 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 29 | 61.25 | humidity | 70.0 | 10 | > th | dose dependent | sin | 2 | NA |
| 32 | 61.26 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 47 | 61.55 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 9 |
| 53 | 61.59 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 62 | 61.69 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 14 |
| 105 | 62.08 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 2 | 17 |
| 156 | 62.46 | wind | 3.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 164 | 62.52 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 15 | 17 |
| 174 | 62.55 | radiation | 1.0 | 90 | < th | dose independent | rect. | 2 | 17 |
| 198 | 62.66 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 199 | 62.66 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 204 | 62.67 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 20 |
| 216 | 62.70 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 18 | 18 |
| 231 | 62.74 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 16 | 20 |
| 262 | 62.80 | radiation | 10.0 | 30 | < th | dose dependent | sin | 2 | NA |
| 300 | 62.88 | humidity | 80.0 | 30 | < th | dose independent | rect. | 21 | 17 |
| 307 | 62.90 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 9 |
| 331 | 62.95 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 334 | 62.95 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 19 |
| 352 | 62.99 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 5 |
| 361 | 63.00 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 22 |
| 362 | 63.00 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 22 |
| 375 | 63.02 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 388 | 63.06 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 19 | 7 |
| 409 | 63.09 | wind | 3.0 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 431 | 63.12 | wind | 3.0 | 14400 | < th | dose dependent | no | NA | NA |
| 435 | 63.13 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 483 | 63.22 | wind | 3.0 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 487 | 63.22 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 512 | 63.28 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 513 | 63.29 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 18 |
| 560 | 63.39 | radiation | 1.0 | 90 | > th | dose independent | sin | 2 | NA |
| 573 | 63.41 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 16 |
| 592 | 63.42 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 18 |
| 607 | 63.44 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 7 |
| 622 | 63.46 | wind | 1.0 | 14400 | < th | dose independent | rect. | 16 | 21 |
| 627 | 63.46 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 19 |
| 629 | 63.47 | wind | 3.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 630 | 63.47 | radiation | 1.0 | 90 | < th | dose independent | sin | 2 | NA |
| 638 | 63.49 | wind | 1.0 | 14400 | > th | dose independent | rect. | 16 | 21 |
| 641 | 63.49 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 646 | 63.50 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 23 | 4 |
| 661 | 63.52 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 7 |
| 668 | 63.54 | wind | 3.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 691 | 63.55 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 715 | 63.57 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 738 | 63.60 | wind | 3.0 | 14400 | < th | dose dependent | sin | 5 | NA |
| 746 | 63.61 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 758 | 63.62 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 769 | 63.63 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 16 |
| 801 | 63.67 | temperature | 20.0 | 90 | > th | dose independent | rect. | 14 | 15 |
| 818 | 63.68 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 7 |
| 847 | 63.70 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 18 |
| 854 | 63.71 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 22 |
| 861 | 63.72 | wind | 1.0 | 14400 | < th | dose independent | rect. | 16 | 10 |
| 865 | 63.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 21 |
| 874 | 63.73 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 879 | 63.73 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 14 | 15 |
| 910 | 63.76 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 919 | 63.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 10 |
| 927 | 63.77 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 929 | 63.77 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 930 | 63.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 940 | 63.78 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 947 | 63.79 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 6 |
| 948 | 63.79 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 16 |
| 977 | 63.81 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 18 |
| 990 | 63.82 | temperature | 25.0 | 720 | < th | dose independent | rect. | 16 | 20 |
| 998 | 63.83 | wind | 1.0 | 14400 | > th | dose independent | no | NA | NA |