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Os05g0108900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.86 (0.032) R2 : 0.507
β1 : -0.843 (0.117) R2dD : 0.0582 R2D : 0.0421
β2 : 1.67 (0.0834) R2dC : 0.437 R2C : 0.441
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.245 (0.0683) R2dN8 : 0.0186 R2N8 : 0.00593
σ : 0.601
deviance : 164.94
__
_____
C
peak time of C : 17.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
150.82 0.577 6.86 -0.775 1.67 1.23 -1.18 1.42 -0.139 17.7 1 1438 -- --
151.29 0.573 6.85 -0.663 1.65 0.995 -1.14 -- -0.13 17.7 1.991 1444 -- --
153.17 0.581 6.85 -0.793 1.78 0.513 -- -1.03 -0.227 16.2 1 1438 -- --
153.81 0.578 6.85 -0.642 1.68 1.03 -- -- -0.125 17.3 1.81 1480 -- --
296.37 0.802 6.8 -0.78 -- 1.1 -- 0.754 -0.145 -- 2.294 1437 -- --
162.05 0.597 6.86 -0.85 1.68 -- -1.11 -- -0.24 17.7 -- -- -- --
164.94 0.601 6.86 -0.843 1.67 -- -- -- -0.245 17.6 -- -- -- --
297.06 0.803 6.8 -0.697 -- 1.02 -- -- -0.125 -- 2.664 1440 -- --
161.41 0.592 6.83 -- 1.73 1.39 -- -- -0.055 17.1 0.1696 1505 -- --
310.26 0.823 6.84 -0.897 -- -- -- -- -0.285 -- -- -- -- --
183.66 0.634 6.84 -- 1.69 -- -- -- -0.151 17.5 -- -- -- --
308.62 0.818 6.79 -- -- 1.23 -- -- -0.047 -- 2.03 1436 -- --
331.51 0.85 6.82 -- -- -- -- -- -0.185 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 141.56 precipitation 0.1 270 < th dose independent rect. 15 15
2 141.56 precipitation 0.1 270 < th dose dependent rect. 15 15
3 141.57 radiation 40.0 270 < th dose independent rect. 15 15
6 141.62 wind 9.0 270 < th dose independent rect. 6 8
7 141.63 temperature 10.0 270 > th dose independent rect. 6 8
8 141.63 atmosphere 995.0 270 > th dose independent rect. 6 8
9 141.63 atmosphere 1015.0 270 < th dose independent rect. 6 8
10 141.63 temperature 10.0 270 > th dose independent rect. 14 16
12 141.73 wind 9.0 270 < th dose independent rect. 14 16
13 141.74 precipitation 0.1 270 < th dose independent rect. 6 8
14 141.74 precipitation 0.1 270 < th dose dependent rect. 6 8
19 141.80 radiation 1.0 270 < th dose dependent rect. 5 22
28 142.91 atmosphere 995.0 270 > th dose independent rect. 14 16
37 143.22 atmosphere 1015.0 270 < th dose independent rect. 14 16
41 143.27 radiation 1.0 10 < th dose dependent sin 11 NA
47 143.30 radiation 1.0 270 < th dose independent rect. 5 22
64 143.70 wind 1.0 270 > th dose independent rect. 6 8
71 143.85 precipitation 0.1 10 < th dose independent rect. 16 17
72 143.85 precipitation 0.1 10 < th dose dependent rect. 16 17
73 143.86 wind 5.0 270 < th dose independent rect. 6 20
77 143.91 temperature 10.0 10 > th dose independent rect. 9 7
79 143.91 atmosphere 1015.0 10 < th dose independent rect. 9 7
80 143.91 precipitation 0.1 10 < th dose independent rect. 9 7
81 143.91 temperature 10.0 10 > th dose independent rect. 16 17
82 143.91 precipitation 0.1 10 < th dose dependent rect. 9 7
88 143.95 precipitation 0.1 270 < th dose independent rect. 1 8
89 143.95 atmosphere 995.0 10 > th dose independent rect. 16 17
90 143.95 precipitation 0.1 270 < th dose dependent rect. 1 8
94 143.97 wind 9.0 90 < th dose dependent rect. 19 8
99 144.01 atmosphere 995.0 10 > th dose independent rect. 9 7
108 144.04 wind 9.0 10 < th dose independent rect. 9 7
109 144.04 radiation 1.0 270 > th dose independent rect. 6 8
113 144.08 wind 9.0 10 < th dose independent rect. 16 17
133 144.19 humidity 50.0 270 > th dose independent rect. 6 8
148 144.25 wind 1.0 270 > th dose independent rect. 13 9
166 144.32 humidity 50.0 270 > th dose independent rect. 14 16
175 144.37 humidity 60.0 270 > th dose independent rect. 1 8
176 144.37 wind 1.0 270 > th dose independent rect. 14 16
179 144.39 radiation 40.0 10 < th dose independent rect. 16 17
181 144.39 radiation 1.0 270 < th dose dependent rect. 17 10
184 144.40 temperature 30.0 270 < th dose independent rect. 18 9
187 144.42 wind 7.0 270 < th dose independent rect. 1 8
190 144.44 radiation 1.0 30 < th dose independent sin 11 NA
194 144.49 wind 9.0 270 < th dose dependent rect. 6 20
204 144.54 atmosphere 1015.0 10 < th dose independent rect. 16 17
207 144.55 temperature 10.0 270 > th dose independent rect. 1 8
210 144.55 atmosphere 995.0 270 > th dose independent rect. 1 8
211 144.55 atmosphere 1015.0 270 < th dose independent rect. 1 8
212 144.55 temperature 10.0 270 > th dose independent rect. 9 16
215 144.57 radiation 1.0 270 < th dose independent rect. 17 10
216 144.58 wind 5.0 270 < th dose independent rect. 21 16
221 144.62 wind 9.0 90 < th dose dependent rect. 8 8
227 144.65 humidity 50.0 270 > th dose dependent rect. 18 9
230 144.66 wind 9.0 270 < th dose dependent rect. 6 8
234 144.68 temperature 30.0 270 < th dose independent rect. 1 8
235 144.68 precipitation 0.1 270 < th dose independent rect. 9 16
236 144.68 precipitation 0.1 270 < th dose dependent rect. 9 16
237 144.68 wind 9.0 90 < th dose dependent rect. 8 19
249 144.80 humidity 60.0 270 > th dose independent rect. 18 9
250 144.80 humidity 50.0 10 > th dose independent rect. 16 17
263 144.87 radiation 1.0 30 > th dose independent rect. 9 7
266 144.90 radiation 40.0 270 < th dose independent rect. 1 8
270 144.92 temperature 15.0 270 > th dose independent rect. 3 15
271 144.92 precipitation 0.1 270 < th dose independent rect. 3 15
274 144.92 precipitation 0.1 270 < th dose dependent rect. 3 15
277 144.94 wind 3.0 90 < th dose independent rect. 8 19
278 144.94 radiation 40.0 270 < th dose dependent rect. 15 15
287 144.99 radiation 40.0 90 < th dose independent rect. 3 8
297 145.04 temperature 10.0 1440 > th dose independent rect. 10 7
301 145.04 temperature 10.0 1440 > th dose independent rect. 17 17
308 145.06 wind 9.0 270 < th dose independent rect. 9 16
311 145.08 atmosphere 995.0 270 > th dose independent rect. 18 9
316 145.09 humidity 60.0 90 > th dose dependent rect. 21 6
318 145.10 wind 9.0 270 < th dose independent rect. 18 9
339 145.16 temperature 10.0 270 > th dose independent rect. 18 9
341 145.16 radiation 20.0 270 < th dose independent rect. 18 9
345 145.16 atmosphere 1015.0 270 < th dose independent rect. 3 15
362 145.19 wind 9.0 270 < th dose independent rect. 22 15
374 145.21 radiation 40.0 90 < th dose dependent rect. 16 17
388 145.25 wind 9.0 270 < th dose independent rect. 3 15
416 145.30 temperature 10.0 270 > th dose independent rect. 13 9
418 145.30 temperature 10.0 270 > th dose independent rect. 22 15
419 145.30 atmosphere 995.0 270 > th dose independent rect. 22 15
435 145.33 wind 1.0 270 > th dose dependent rect. 13 9
438 145.34 precipitation 0.1 270 < th dose independent rect. 18 9
442 145.34 precipitation 0.1 270 < th dose dependent rect. 18 9
443 145.35 temperature 10.0 10 > th dose dependent rect. 9 7
465 145.41 precipitation 0.1 270 < th dose independent rect. 3 2
469 145.41 precipitation 0.1 270 < th dose dependent rect. 3 2
508 145.48 atmosphere 1015.0 270 < th dose independent rect. 13 8
539 145.58 wind 9.0 270 < th dose dependent rect. 3 2
541 145.59 wind 9.0 270 < th dose independent rect. 13 9
550 145.60 radiation 40.0 10 < th dose dependent rect. 16 17
576 145.70 wind 5.0 270 < th dose independent rect. 3 2
594 145.73 atmosphere 995.0 270 > th dose independent rect. 9 16
620 145.80 precipitation 0.1 270 < th dose independent rect. 13 8
624 145.80 precipitation 0.1 270 < th dose dependent rect. 13 8
660 145.89 humidity 80.0 90 > th dose independent rect. 21 7
670 145.94 wind 7.0 90 < th dose independent rect. 21 7
678 145.97 precipitation 0.1 90 < th dose independent rect. 3 6
683 145.97 precipitation 0.1 90 < th dose dependent rect. 3 6
702 146.00 radiation 40.0 270 < th dose dependent rect. 1 8
703 146.01 wind 1.0 30 > th dose independent rect. 9 7
704 146.01 atmosphere 995.0 270 > th dose independent rect. 3 15
773 146.10 temperature 10.0 270 > th dose dependent rect. 6 8
801 146.18 humidity 50.0 270 > th dose independent rect. 9 16
802 146.18 precipitation 0.1 270 < th dose independent rect. 21 16
804 146.18 precipitation 0.1 270 < th dose dependent rect. 21 16
828 146.20 precipitation 0.1 90 < th dose independent rect. 9 18
835 146.20 precipitation 0.1 90 < th dose dependent rect. 9 18
839 146.21 wind 9.0 90 < th dose dependent rect. 3 6
858 146.25 humidity 60.0 90 > th dose independent rect. 3 6
870 146.28 wind 9.0 90 < th dose independent rect. 9 18
887 146.31 temperature 10.0 270 > th dose independent rect. 3 2
889 146.31 temperature 30.0 270 < th dose independent rect. 3 2
890 146.31 humidity 50.0 270 > th dose independent rect. 3 2
893 146.31 atmosphere 995.0 270 > th dose independent rect. 3 2
894 146.31 atmosphere 1010.0 270 < th dose independent rect. 3 2
896 146.31 radiation 20.0 270 < th dose independent rect. 3 2
905 146.31 temperature 10.0 270 > th dose independent rect. 5 22
923 146.34 radiation 30.0 270 < th dose dependent rect. 3 2
931 146.36 wind 9.0 90 < th dose independent rect. 3 6
933 146.36 temperature 10.0 90 > th dose independent rect. 3 6
935 146.36 temperature 30.0 90 < th dose independent rect. 3 6
937 146.36 atmosphere 995.0 90 > th dose independent rect. 3 6
938 146.36 atmosphere 1015.0 90 < th dose independent rect. 3 6
942 146.36 temperature 10.0 90 > th dose independent rect. 9 18
957 146.39 radiation 1.0 270 < th dose independent rect. 3 2
961 146.39 wind 9.0 270 < th dose independent rect. 5 22
966 146.40 temperature 10.0 90 > th dose independent rect. 21 7
967 146.40 temperature 30.0 90 < th dose independent rect. 21 7
968 146.40 humidity 50.0 90 > th dose independent rect. 21 7
971 146.40 atmosphere 995.0 90 > th dose independent rect. 21 7
972 146.40 radiation 1.0 90 < th dose independent rect. 21 7
983 146.40 radiation 1.0 90 < th dose dependent rect. 21 7
992 146.41 temperature 20.0 270 > th dose independent rect. 6 19
993 146.41 precipitation 0.1 270 < th dose independent rect. 5 22
998 146.41 precipitation 0.1 270 < th dose dependent rect. 5 22
999 146.42 humidity 90.0 90 < th dose independent rect. 8 8