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Os05g0108300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to MAP kinase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.71 (0.0192) R2 : 0.559
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.999 (0.0475) R2dC : 0.428 R2C : 0.404
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.451 (0.0405) R2dN8 : 0.155 R2N8 : 0.131
σ : 0.363
deviance : 60.09
__
_____
C
peak time of C : 2.67
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.7 0.314 7.75 -0.185 0.977 -1.04 -0.0122 1.8 0.347 2.6 19.28 1428 -- --
45.59 0.314 7.73 -0.106 0.996 -1.72 -0.146 -- 0.381 2.69 17.38 1962 -- --
44.7 0.311 7.75 -0.181 0.977 -1.05 -- 1.81 0.348 2.6 19.22 1425 -- --
45.61 0.315 7.73 -0.116 0.989 -1.72 -- -- 0.378 2.69 17.37 1989 -- --
95.61 0.455 7.77 -0.295 -- -1.02 -- 1.4 0.278 -- 22.4 1006 -- --
59.22 0.361 7.7 0.177 0.996 -- -0.0862 -- 0.47 2.67 -- -- -- --
59.25 0.36 7.7 0.179 0.996 -- -- -- 0.471 2.67 -- -- -- --
95.15 0.454 7.73 -0.155 -- -1.79 -- -- 0.355 -- 19.69 1005 -- --
45.81 0.315 7.72 -- 0.989 -1.87 -- -- 0.399 2.59 17.52 1572 -- --
117.1 0.506 7.7 0.221 -- -- -- -- 0.496 -- -- -- -- --
60.09 0.363 7.71 -- 0.999 -- -- -- 0.451 2.67 -- -- -- --
95.63 0.455 7.73 -- -- -1.72 -- -- 0.377 -- 19.52 998 -- --
118.39 0.508 7.7 -- -- -- -- -- 0.471 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 42.41 precipitation 0.1 14400 > th dose dependent rect. 19 1
2 42.44 precipitation 0.1 14400 > th dose independent rect. 19 1
3 42.45 precipitation 0.1 14400 < th dose independent rect. 19 1
4 42.45 precipitation 0.1 14400 < th dose dependent rect. 19 1
5 42.56 radiation 1.0 14400 > th dose independent rect. 7 1
6 42.56 radiation 1.0 14400 < th dose independent rect. 7 1
7 43.13 radiation 1.0 4320 < th dose dependent rect. 7 3
8 43.16 humidity 90.0 14400 > th dose dependent rect. 3 7
10 43.20 humidity 90.0 14400 > th dose dependent rect. 2 9
12 43.26 radiation 1.0 14400 < th dose dependent rect. 7 1
20 43.49 precipitation 0.1 14400 > th dose independent rect. 7 1
21 43.49 precipitation 0.1 14400 > th dose dependent rect. 7 1
28 43.66 precipitation 0.1 14400 < th dose independent rect. 7 1
29 43.66 precipitation 0.1 14400 < th dose dependent rect. 7 1
40 43.90 radiation 1.0 4320 < th dose dependent rect. 7 10
43 43.95 humidity 90.0 14400 > th dose dependent rect. 1 20
46 44.04 humidity 80.0 43200 < th dose dependent rect. 6 1
51 44.11 humidity 90.0 14400 > th dose dependent sin 5 NA
57 44.19 temperature 20.0 1440 < th dose dependent rect. 3 13
59 44.19 humidity 90.0 14400 > th dose dependent rect. 18 17
81 44.28 radiation 1.0 4320 < th dose dependent rect. 7 8
89 44.34 temperature 20.0 1440 < th dose dependent sin 2 NA
102 44.37 humidity 80.0 43200 < th dose dependent rect. 5 3
180 44.64 humidity 90.0 14400 > th dose dependent rect. 7 23
258 44.84 humidity 90.0 14400 > th dose dependent no NA NA
280 44.89 precipitation 0.1 1440 > th dose independent rect. 7 6
281 44.89 precipitation 0.1 1440 > th dose dependent rect. 7 6
296 44.92 humidity 80.0 43200 < th dose independent rect. 6 1
320 44.95 radiation 1.0 4320 < th dose independent rect. 7 8
324 44.95 temperature 20.0 1440 < th dose dependent rect. 7 23
325 44.96 radiation 1.0 4320 > th dose independent rect. 7 8
332 44.97 temperature 15.0 4320 > th dose independent rect. 5 4
351 45.00 temperature 20.0 1440 < th dose dependent no NA NA
359 45.01 humidity 90.0 14400 > th dose dependent rect. 12 18
397 45.06 temperature 20.0 30 < th dose dependent rect. 6 23
398 45.06 temperature 20.0 1440 < th dose dependent rect. 13 23
400 45.07 precipitation 0.1 14400 > th dose independent rect. 5 9
402 45.07 temperature 20.0 30 < th dose dependent rect. 9 20
408 45.08 wind 5.0 43200 < th dose dependent rect. 4 2
429 45.11 precipitation 0.1 14400 > th dose independent rect. 7 7
436 45.12 wind 3.0 43200 > th dose independent rect. 5 1
455 45.15 temperature 20.0 1440 < th dose dependent rect. 11 23
459 45.16 temperature 20.0 10 < th dose dependent rect. 13 23
470 45.18 temperature 20.0 10 < th dose dependent rect. 15 21
501 45.22 temperature 20.0 30 < th dose dependent no NA NA
503 45.22 temperature 20.0 90 < th dose dependent rect. 11 18
510 45.22 temperature 20.0 30 < th dose dependent rect. 1 23
513 45.22 temperature 20.0 30 < th dose dependent rect. 11 23
515 45.22 temperature 20.0 30 < th dose dependent rect. 23 23
526 45.23 temperature 20.0 30 < th dose dependent rect. 3 23
528 45.23 temperature 20.0 30 < th dose dependent rect. 17 23
529 45.23 temperature 20.0 30 < th dose dependent rect. 19 23
530 45.24 precipitation 0.1 1440 > th dose independent rect. 7 4
533 45.24 wind 1.0 43200 > th dose dependent rect. 4 2
534 45.24 precipitation 0.1 1440 > th dose dependent rect. 7 4
541 45.24 temperature 20.0 30 < th dose dependent rect. 21 23
543 45.25 precipitation 0.1 14400 < th dose independent rect. 5 9
544 45.25 precipitation 0.1 14400 < th dose dependent rect. 5 9
566 45.28 wind 3.0 43200 < th dose independent rect. 5 1
579 45.29 precipitation 0.1 14400 < th dose independent rect. 7 7
583 45.29 precipitation 0.1 14400 < th dose dependent rect. 7 7
584 45.29 humidity 90.0 14400 > th dose dependent rect. 18 10
607 45.32 humidity 80.0 14400 > th dose dependent rect. 13 1
625 45.35 humidity 90.0 14400 > th dose independent rect. 2 8
655 45.39 precipitation 0.1 4320 < th dose independent rect. 4 4
656 45.39 precipitation 0.1 4320 < th dose dependent rect. 4 4
662 45.40 precipitation 0.1 4320 > th dose independent rect. 4 4
712 45.49 temperature 15.0 1440 > th dose independent rect. 18 11
721 45.50 humidity 90.0 720 > th dose dependent rect. 8 11
749 45.53 precipitation 0.1 14400 > th dose independent rect. 9 1
750 45.53 precipitation 0.1 14400 > th dose dependent rect. 9 1
757 45.54 precipitation 0.1 14400 < th dose independent rect. 9 1
758 45.54 temperature 15.0 1440 > th dose independent rect. 3 9
761 45.54 humidity 80.0 1440 > th dose dependent rect. 10 1
762 45.54 precipitation 0.1 14400 < th dose dependent rect. 9 1
772 45.56 humidity 80.0 43200 > th dose independent rect. 6 1
796 45.59 humidity 90.0 14400 > th dose dependent rect. 7 3
842 45.64 wind 9.0 43200 < th dose dependent rect. 23 8
856 45.65 temperature 15.0 1440 < th dose independent rect. 4 2
858 45.65 temperature 15.0 1440 < th dose dependent rect. 4 3
860 45.65 precipitation 0.1 4320 > th dose dependent rect. 4 4
868 45.66 temperature 15.0 4320 < th dose independent rect. 3 4
897 45.68 wind 1.0 43200 > th dose dependent rect. 23 8
925 45.70 precipitation 0.1 14400 > th dose dependent rect. 6 8
932 45.71 temperature 15.0 1440 > th dose independent sin 3 NA
966 45.74 temperature 15.0 4320 < th dose dependent rect. 1 2