Os05g0107600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxisomal ABC transporter.
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Os05g0107600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxisomal ABC transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.31 | 0.283 | 9.97 | -0.645 | 0.706 | -0.486 | -0.132 | 0.433 | 0.242 | 8.85 | 29.94 | 1263 | -- | -- |
| 36.33 | 0.281 | 9.95 | -0.563 | 0.706 | -0.442 | -0.109 | -- | 0.251 | 8.85 | 29.94 | 1246 | -- | -- |
| 36.36 | 0.281 | 9.97 | -0.647 | 0.708 | -0.486 | -- | 0.417 | 0.242 | 8.86 | 29.95 | 1256 | -- | -- |
| 36.34 | 0.281 | 9.97 | -0.568 | 0.696 | -0.444 | -- | -- | 0.212 | 8.84 | 29.8 | 1255 | -- | -- |
| 63.9 | 0.372 | 9.98 | -0.636 | -- | -0.438 | -- | 0.485 | 0.282 | -- | 30.5 | 1422 | -- | -- |
| 45.98 | 0.318 | 9.97 | -0.42 | 0.681 | -- | -0.168 | -- | 0.187 | 8.49 | -- | -- | -- | -- |
| 46.07 | 0.318 | 9.97 | -0.426 | 0.682 | -- | -- | -- | 0.187 | 8.49 | -- | -- | -- | -- |
| 63.68 | 0.372 | 9.98 | -0.562 | -- | -0.412 | -- | -- | 0.223 | -- | 29.7 | 1444 | -- | -- |
| 44.34 | 0.31 | 9.95 | -- | 0.698 | -0.348 | -- | -- | 0.262 | 8.83 | 29.8 | 1247 | -- | -- |
| 72.07 | 0.397 | 9.99 | -0.423 | -- | -- | -- | -- | 0.194 | -- | -- | -- | -- | -- |
| 50.85 | 0.334 | 9.96 | -- | 0.68 | -- | -- | -- | 0.234 | 8.53 | -- | -- | -- | -- |
| 71.46 | 0.394 | 9.97 | -- | -- | -0.304 | -- | -- | 0.276 | -- | 29.78 | 1417 | -- | -- |
| 76.78 | 0.409 | 9.98 | -- | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.47 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 10 |
| 4 | 34.31 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 3 |
| 7 | 34.80 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 10 |
| 14 | 35.35 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 2 |
| 21 | 35.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 22 | 35.90 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 40 | 35.94 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 41 | 35.94 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 51 | 36.07 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 3 |
| 110 | 36.32 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 119 | 36.37 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 145 | 36.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 183 | 36.49 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 209 | 36.59 | temperature | 30 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 215 | 36.62 | temperature | 30 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 269 | 36.71 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 302 | 36.74 | wind | 1 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 336 | 36.75 | temperature | 30 | 1440 | > th | dose dependent | sin | 15 | NA |
| 342 | 36.76 | temperature | 30 | 1440 | > th | dose dependent | rect. | 16 | 22 |
| 352 | 36.78 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 398 | 36.81 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 399 | 36.81 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 509 | 36.83 | humidity | 80 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 513 | 36.83 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 517 | 36.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 537 | 36.85 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 557 | 36.88 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 562 | 36.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 17 |
| 588 | 36.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 675 | 36.94 | temperature | 30 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 767 | 36.99 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 777 | 37.00 | temperature | 30 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 790 | 37.01 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 797 | 37.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 865 | 37.02 | temperature | 30 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 867 | 37.02 | temperature | 30 | 14400 | < th | dose independent | rect. | 17 | 5 |