Os05g0106700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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Os05g0106700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 194.74 | 0.656 | 4.85 | 2.36 | 1.15 | -1.35 | 1.21 | -3.27 | -0.00628 | 3.83 | 28.9 | 84 | -- | -- |
| 207.12 | 0.67 | 4.9 | 1.83 | 1.12 | -1.41 | 0.334 | -- | -0.0808 | 4.25 | 47.64 | 199 | -- | -- |
| 197.97 | 0.655 | 4.86 | 2.25 | 1.15 | -1.32 | -- | -2.54 | -0.0407 | 3.75 | 28.87 | 90 | -- | -- |
| 205.76 | 0.668 | 4.92 | 1.8 | 1.11 | -1.26 | -- | -- | -0.139 | 3.75 | 29.6 | 88 | -- | -- |
| 243.91 | 0.727 | 4.86 | 2.29 | -- | -0.696 | -- | -2.06 | 0.106 | -- | 24.2 | 50 | -- | -- |
| 227.51 | 0.707 | 4.86 | 2.12 | 0.716 | -- | 0.0773 | -- | 0.113 | 4.29 | -- | -- | -- | -- |
| 227.53 | 0.706 | 4.86 | 2.12 | 0.716 | -- | -- | -- | 0.113 | 4.25 | -- | -- | -- | -- |
| 226.22 | 0.701 | 4.94 | 1.92 | -- | -1.29 | -- | -- | -0.152 | -- | 33.97 | 1298 | -- | -- |
| 282.24 | 0.782 | 4.99 | -- | 1.43 | -2.05 | -- | -- | -0.471 | 3.65 | 29.52 | 91 | -- | -- |
| 255.21 | 0.746 | 4.86 | 2.15 | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
| 345.83 | 0.87 | 4.91 | -- | 0.757 | -- | -- | -- | -0.123 | 4.2 | -- | -- | -- | -- |
| 229.57 | 0.706 | 5.05 | -- | -- | -1.95 | -- | -- | -0.693 | -- | 46.68 | 47351 | -- | -- |
| 376.83 | 0.906 | 4.92 | -- | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 185.55 | temperature | 10 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 7 | 192.07 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 10 | 192.66 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 21 |
| 13 | 193.01 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 21 | 194.28 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 6 |
| 29 | 194.73 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 34 | 195.03 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 37 | 195.15 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 40 | 195.21 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 41 | 195.31 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 17 |
| 42 | 195.35 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 56 | 195.35 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 57 | 195.37 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 60 | 195.40 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 61 | 195.40 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 64 | 195.41 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 82 | 195.55 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 4 |
| 83 | 195.55 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 19 |
| 107 | 195.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 17 |
| 126 | 195.69 | temperature | 30 | 14400 | > th | dose dependent | sin | 13 | NA |
| 132 | 195.70 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 20 |
| 208 | 195.87 | temperature | 30 | 14400 | > th | dose independent | sin | 12 | NA |
| 216 | 195.97 | temperature | 30 | 14400 | < th | dose independent | sin | 12 | NA |
| 272 | 196.12 | temperature | 15 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 283 | 196.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 12 |
| 314 | 196.34 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 17 |
| 315 | 196.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 375 | 196.57 | temperature | 30 | 14400 | > th | dose dependent | no | NA | NA |
| 569 | 196.82 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 574 | 196.85 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 12 |
| 616 | 196.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 619 | 196.97 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 630 | 197.03 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 631 | 197.03 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 791 | 197.09 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 792 | 197.10 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 794 | 197.11 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 16 |
| 809 | 197.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 838 | 197.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 20 |
| 839 | 197.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 23 | 20 |
| 847 | 197.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 22 |
| 856 | 197.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 21 | 23 |
| 860 | 197.13 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |